Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4643 |
Symbol | |
ID | 6278268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 732189 |
End bp | 732854 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642615730 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_001888383 |
Protein GI | 187919352 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.215636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.668191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAACA AGCTCACGCT CGCAGACCAG CTGCGCGAAT CCATCGAGGA AGCCATTGCG ACCGGCGACC TGCCGCCGGG CGCGCCGCTC GACGAGGCCG AATTGATCGC GCGCTTCGAG GTGTCCAGAA CGCCCGTGCG CGAGGCGCTT CTCCAATTGG CCGCGGCAGG TATGGTGGAG ATGCGGCCGC GGCACGGCGC CGTGGTCGCG AAGATCAGCC TGCACAGGCT GATCGAGATG TTCGAGGTGA TGGCCGAACT CGAGGCGATG TGCAGCCGCC TTGCCGCGCG GCGCATGAAC GCGCAGGAAT TGCAGACGCT GCGCGAGGCG CACGTGGCAT GTCAGAAAGC GCGCGACGCC GGCAGCCCGG ACGAATATTT CCATCTGAAC GAGCGCTTTC ACTGCCTGAT CTATCAAGGC AGTCACAACA GTTTTCTGCA CGACCAGGCG AAGGCGCTCC ATAAACTGCT GCGCCCGTAC CGGCGTTTGC AGTTGCGCGT CAAAGGCCGC GTGGCCGCCT CGTTCGATGA ACACCAGGCG GTCGTGGACG CGCTCGAAGC GGGCGACGGC GAAGCCGCTG CCGCCGCGTT GAGAGGGCAC ATTCTGGTTC AGGGAGAACG CTTCGGCGAC CTGATTGCCG CGCTTGCGCA AGTCAGCGCG CAATAG
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Protein sequence | MTNKLTLADQ LRESIEEAIA TGDLPPGAPL DEAELIARFE VSRTPVREAL LQLAAAGMVE MRPRHGAVVA KISLHRLIEM FEVMAELEAM CSRLAARRMN AQELQTLREA HVACQKARDA GSPDEYFHLN ERFHCLIYQG SHNSFLHDQA KALHKLLRPY RRLQLRVKGR VAASFDEHQA VVDALEAGDG EAAAAALRGH ILVQGERFGD LIAALAQVSA Q
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