Gene Bphyt_4643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4643 
Symbol 
ID6278268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp732189 
End bp732854 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content65% 
IMG OID642615730 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001888383 
Protein GI187919352 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.215636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.668191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACA AGCTCACGCT CGCAGACCAG CTGCGCGAAT CCATCGAGGA AGCCATTGCG 
ACCGGCGACC TGCCGCCGGG CGCGCCGCTC GACGAGGCCG AATTGATCGC GCGCTTCGAG
GTGTCCAGAA CGCCCGTGCG CGAGGCGCTT CTCCAATTGG CCGCGGCAGG TATGGTGGAG
ATGCGGCCGC GGCACGGCGC CGTGGTCGCG AAGATCAGCC TGCACAGGCT GATCGAGATG
TTCGAGGTGA TGGCCGAACT CGAGGCGATG TGCAGCCGCC TTGCCGCGCG GCGCATGAAC
GCGCAGGAAT TGCAGACGCT GCGCGAGGCG CACGTGGCAT GTCAGAAAGC GCGCGACGCC
GGCAGCCCGG ACGAATATTT CCATCTGAAC GAGCGCTTTC ACTGCCTGAT CTATCAAGGC
AGTCACAACA GTTTTCTGCA CGACCAGGCG AAGGCGCTCC ATAAACTGCT GCGCCCGTAC
CGGCGTTTGC AGTTGCGCGT CAAAGGCCGC GTGGCCGCCT CGTTCGATGA ACACCAGGCG
GTCGTGGACG CGCTCGAAGC GGGCGACGGC GAAGCCGCTG CCGCCGCGTT GAGAGGGCAC
ATTCTGGTTC AGGGAGAACG CTTCGGCGAC CTGATTGCCG CGCTTGCGCA AGTCAGCGCG
CAATAG
 
Protein sequence
MTNKLTLADQ LRESIEEAIA TGDLPPGAPL DEAELIARFE VSRTPVREAL LQLAAAGMVE 
MRPRHGAVVA KISLHRLIEM FEVMAELEAM CSRLAARRMN AQELQTLREA HVACQKARDA
GSPDEYFHLN ERFHCLIYQG SHNSFLHDQA KALHKLLRPY RRLQLRVKGR VAASFDEHQA
VVDALEAGDG EAAAAALRGH ILVQGERFGD LIAALAQVSA Q