| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4618 |
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| Symbol | |
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| ID | 6279285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 702385 |
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| End bp | 703362 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615706 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001888359 |
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| Protein GI | 187919328 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.347884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGT CGTTTATCGG CTTTGCGGTG CTCGCGTTTC TCGCGGTGGT GCTGGCCATC
GAGGCCGTTT ATCTGTTCTG GAGCAGCCAC CACGGCAAGG ACGTCAAGCG CATGGACGAG
CGCATTCGTG CGCTCTCCGC CGGCGGCAAC GTGAGCAGCC AACAGCTCTC GATTCTCAAG
CAGCGCATGC TGAGCGAGTC GCCGTTCGTC ACGCAGTTGC TGCTTCGCAT ACCGCGCGTG
CATGCGCTCG ATCGGCAGTT GCAGCAGTCA GGACTGAAGT GGTCGGTGGC GCGCTTCGTT
ACCTACACGT TGCTGTGCGC GGTGCTCGGC GCCTTGGGCG GGTTTGTGCT GCTATTGCCC
GCGCCGGTGA TGGGCGTGTT CGCTGTGGTG GCGAGCCTGC TGCCCACGCT GATTCTTTGC
CGCAAGCGCA CCAAACGCGT GCTGCAGCTC GAACGCCAGT TGCCCGACGC GGCCGATCTG
ATCGCCCGCG CGCTGCGCGC CGGCCATTCG TTTCCGGCCG CGCTCGGCAT GGTCGGCGAA
GAACTACCCA ATCCGCTCGG CGGCGAATTC GCGCTGGTGT TCGACGAGAT CAACTACGGC
GTGTCGATGA GCGACGCGCT TCTGAACATG GTGAATCGCG TGCCGGTCGA GGATCTGCGC
TACTTCGTGA TCGCCGTGCT GATCCAGCGC GAGGCAGGCG GCAATCTGGC GGAGATTCTC
GGATCCATCG CCGGCATCAT TCGCGAACGG CTCAAGCTGC TCGGCAAGGT GCGCGTGCTG
TCGGCGGAAG GGCGGTTGTC GGCCTGGGTG CTGGGCGTGT TGCCATTCGC CATTCTCGGG
CTGCTGTCGG TGCTCAATCC CGGCTACATC AGCGTGTTCT GGAAGGACCC GGCGGGCCCG
CAAATCGCCG GCGTGGCGAT CGCGATGATG CTGTTCGGTA TCTTGTGGAT GCGTAAAGTG
GTGCGCATTC GCGTCTAG
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| Protein sequence | MNTSFIGFAV LAFLAVVLAI EAVYLFWSSH HGKDVKRMDE RIRALSAGGN VSSQQLSILK
QRMLSESPFV TQLLLRIPRV HALDRQLQQS GLKWSVARFV TYTLLCAVLG ALGGFVLLLP
APVMGVFAVV ASLLPTLILC RKRTKRVLQL ERQLPDAADL IARALRAGHS FPAALGMVGE
ELPNPLGGEF ALVFDEINYG VSMSDALLNM VNRVPVEDLR YFVIAVLIQR EAGGNLAEIL
GSIAGIIRER LKLLGKVRVL SAEGRLSAWV LGVLPFAILG LLSVLNPGYI SVFWKDPAGP
QIAGVAIAMM LFGILWMRKV VRIRV
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