| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4613 |
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| Symbol | |
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| ID | 6278122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 696668 |
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| End bp | 697477 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642615701 |
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| Product | Flp pilus assembly protein CpaB |
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| Protein accession | YP_001888354 |
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| Protein GI | 187919323 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.310892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTGA TCGCGACGCT GGCGGGCCTC ACCGCGGTGG TGTTCGCCTC GCGCTGGATG
GTCTCGCAGT CGTCGAATGC CACGACCAGA GTCGTGGTGG CGGCAGCCGA CATCAATCTG
GGCCAGCGGA TCGGCCCGGA CTACCTCAAG CTCACCGACT GGCCGTCCAA TAGCGTGCCG
CCCGGTTCGT ACTCCGACAT CCAGAAACTC GACGGCCGCG TGCTGAAGGA AAGCCTGCTG
CGCGGCGAAC CGATTCTCGA TGCGAAGCTC ACGCCGGTCG GCACGCTCGG CGGGCTTTCC
GCGGTGATCG GCGAAGGCAA GCGCGCCATC ACGGTACGCG TGAACGACGT GATCGGCGTG
GCGGGCTTCG CGCTGCCGGG CAATTACGTC GACATCATCG TCAACACGCA AAAAGATGGC
CGCGATCCAG GCGCAACGCG CGATCAGAAC ATCTCCAAGA TCGTGCTCGA AAAGATTCTC
GTGCTGGCCG TCGCGCAGGA AGTGGGCCGC GACGAAACCA AGCCGAAGGT GGTCGACGCG
GTGACGCTCG AAGTGTTGCC GGAACAGGCC GAGAAGATCG ACCTTGCGCG CAGCATCGGC
ACGCTGTCGC TGGTGTTGCG TAACCAGATC GATCCGAAAG CGATCGACAC CGCCGGCGCC
ACCAAGGCCA GCCTGCTGCA GACGCCGGTC GCCGTGGCGC CCGCGCCGGA ACCGAAGCCG
GTGCATATCG TGCGCAAAGT CGCGGCGCAC GCGCCGGCCA ACTGTGTGCG GGTGCTCGAT
GGCGCCGACG TAAGACAAGA ATGCTTTTGA
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| Protein sequence | MLLIATLAGL TAVVFASRWM VSQSSNATTR VVVAAADINL GQRIGPDYLK LTDWPSNSVP
PGSYSDIQKL DGRVLKESLL RGEPILDAKL TPVGTLGGLS AVIGEGKRAI TVRVNDVIGV
AGFALPGNYV DIIVNTQKDG RDPGATRDQN ISKIVLEKIL VLAVAQEVGR DETKPKVVDA
VTLEVLPEQA EKIDLARSIG TLSLVLRNQI DPKAIDTAGA TKASLLQTPV AVAPAPEPKP
VHIVRKVAAH APANCVRVLD GADVRQECF
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