| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4574 |
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| Symbol | |
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| ID | 6278217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 650350 |
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| End bp | 650919 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615664 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_001888317 |
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| Protein GI | 187919286 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCCA ATCCTCGAGA ACTGACGCCG GAAACGCTCG CCGAACTGCT CGAACGTGTC
GCCAAACAAG ATGGCGCAGC GTTGCGCGAG CTTTATGATC TCGCCGCCCC GAAACTGTTT
GGCCTCGCGC TCCGTATATT GAGCAGGCAC GAGTGGGCCG AAGAAGTTTT GCAGGACAGC
TTCGTCAATA TCTGGCGCTT TGCCGGCGAC TATCGCCGCG CATTGTCCGC CCCGATGACG
TGGATGTCGG CGATCGTCCG CAACCGTGCT CTCGATCACC TGCGGCGGGT CAACACGCAG
GAAACGGAAT GGAGCGATGC GTTGGACGAT CTCGTGGCGA CCGGCGACCC GGATCCCGAA
GCGCTGAGCG CGGTCAGCCT GCAGGCGCGT TTGCTGGCCG GCTGCATGCA GCAGCTCGAA
CCCGCGCAAC GCCAGGCGGT TGCCCTCGCG TATCTGCGCG ATCAGAGCCA TAGCGAGATC
GCCGAAGTGC TGAGCGTGCC GCTCGGCACT ATCAAGTCGT GGATCCGGCG CGGCCTCGCC
AAGCTGAAGA CCTGCCTGGG AGGCGAGTGA
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| Protein sequence | MTANPRELTP ETLAELLERV AKQDGAALRE LYDLAAPKLF GLALRILSRH EWAEEVLQDS
FVNIWRFAGD YRRALSAPMT WMSAIVRNRA LDHLRRVNTQ ETEWSDALDD LVATGDPDPE
ALSAVSLQAR LLAGCMQQLE PAQRQAVALA YLRDQSHSEI AEVLSVPLGT IKSWIRRGLA
KLKTCLGGE
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