| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4489 |
|---|
| Symbol | |
|---|
| ID | 6278798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 557767 |
|---|
| End bp | 558645 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642615580 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001888233 |
|---|
| Protein GI | 187919202 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAACT ACCGGCATCT GTATTACTTC TGGATAGTAG TGAAGGAGGG CGGCTTCGCG
CGTGCGGCCG AACGTCTCGA TATGGCGGTG CAGACCATCA GCGCGCAGGT GCGGGAGCTG
GAGAAATCGA TTGGGCGGCA ATTGCTGAAG CCGGCGGGGC GCGGCGTCAC AATGACCGAA
GCAGGCGAGA CGGCCTTCAA TCGCGCGGAG CAGATTTTTC AGCTTGGCGA GGCGCTCCTC
GACGATATGC GCGAGGCCGG TGGGGAAGGT GTGGCGCGCC TCGCCGTCGG TCTTTCCGAC
GGTATTTCGA AGCTCGCGGC GCATGCGCTG CTGGCGCCGG TGCTCGGCAC GCCGTCGCTC
AGGCTTTTAT GTCACGAGGG CGAGCACGCC GAGCTGATGT CGGAACTCGC GCTTCATCGG
CTCGATCTGG TGCTCGCTTG CCAGCCGGAG CCGCACAATG CCGACCTGCG CGTGCTGAGC
CAGCGCCTGG CCGGTTCGCC GGTCGACTGG TACGGCCCGA CGGGGATCGT CCGCAAATCC
GCGCGCGCGG GCTTTCCACA GTGCCTCGCC GAGGTGCCCG TGCTTCTGCC GACCCGGCAC
GCCGCTTTGC GTGCGCGGCT CGACCGTTGG TTCGACGCGC AAGGCATCCG GCCGCACATC
GTCGGCGAAT TCGAGGACAG CGCGCTGATG GCGGTGTTTG CCGCGCGCGG CCTCGGCGTG
TTTCCGCTCG CGGAGCTCGG CGCGGAAGAT CTGTCGCTGC TGCGGGGCCT GCGCTGGCTC
GGCCGCGCCG ATGGCGTGAT CGAGGAGATT CACGCCATCC GTTCGCGTCG CGGGCAACAT
CACGGGCTCG CTTCTCAGGT GGTGGCCGGC GCGCGCTGA
|
|---|
| Protein sequence | MLNYRHLYYF WIVVKEGGFA RAAERLDMAV QTISAQVREL EKSIGRQLLK PAGRGVTMTE
AGETAFNRAE QIFQLGEALL DDMREAGGEG VARLAVGLSD GISKLAAHAL LAPVLGTPSL
RLLCHEGEHA ELMSELALHR LDLVLACQPE PHNADLRVLS QRLAGSPVDW YGPTGIVRKS
ARAGFPQCLA EVPVLLPTRH AALRARLDRW FDAQGIRPHI VGEFEDSALM AVFAARGLGV
FPLAELGAED LSLLRGLRWL GRADGVIEEI HAIRSRRGQH HGLASQVVAG AR
|
|---|
| |