Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4476 |
Symbol | |
ID | 6278269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 545599 |
End bp | 546246 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642615569 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_001888222 |
Protein GI | 187919191 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACG CCTCACCCGC TATCGCCCGC CTGATTCTCG TCGACGATCA TCCGCTCGTG CGCGACGGTT TGCGCGCGCG GCTCGAAGCG GTGCGCCACC TCGAAGTGGT CGGCGAAGCC GGCAATGCGC AGGAAGCGCT CGCCCTCGCC GCGAGCGCGG AGCCTCATCT CGTGCTGATG GATGTCGGCA TGAACGGAAT GAACGGCATC GCGCTGGCCG GCATGTTTCA CGAACGCTTC CCGGCGATTC GCGTGCTCAT GCTGTCGATG CACGACAATC TCGAGTACGT GACCCAGGCA GTGCGCGCGG GTGCGAGCGG CTACGTGCTG AAGGATTCGC CTTCCACCGA GATCATCCAG GCAATTGGCG CGGTGCTCGA AGGCAAACAG TTTTTCAGCG CGGGACTTGG CGCGCGTCTG ATTCAGGCTT CGGCTATGCA GTCGCCCGTC GAACGGCTCA CGCCGCGCGA GCGCGACATT CTCGATGCGC TTGCGGAAGG CTTGTCGAGC AAACAGATCG CTCAGCGCAA CGATCTCTCC GTGCGGACGG TGGAAACGCA TCGGCTGAAT CTGAAGCGCA AGCTCGATAT TGAAGGTCAG GCCGAATTGA TCAAGTTCGC GGTGGAGAAC CGGCGCACGA ACCGGTGA
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Protein sequence | MNDASPAIAR LILVDDHPLV RDGLRARLEA VRHLEVVGEA GNAQEALALA ASAEPHLVLM DVGMNGMNGI ALAGMFHERF PAIRVLMLSM HDNLEYVTQA VRAGASGYVL KDSPSTEIIQ AIGAVLEGKQ FFSAGLGARL IQASAMQSPV ERLTPRERDI LDALAEGLSS KQIAQRNDLS VRTVETHRLN LKRKLDIEGQ AELIKFAVEN RRTNR
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