Gene Bphyt_4450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4450 
Symbol 
ID6279593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp518424 
End bp519983 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content65% 
IMG OID642615543 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001888196 
Protein GI187919165 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000313766 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGGT TTCGCCTGAA GGTGCGGCTT TGGCTCGCGC TGGCAGTCAT GTGCATGGGT 
ATTCTGGCAA TCGGCCTGTG GGGCGCTTTC AAAACACGCG ACACGATGAT CGCCGATCGT
CAGGCCGAAC TGAAGAGCGT GGTCAGCGTC GCCTACAGCG TGCTGGATCG CTATAACGGC
CTGGTCGCCG CGGGTTCGAT GCCGCTCGCC GACGCGCAAC GCACGGCAAT GGCCGATCTG
CGCGCGATGC GCTACGACGG CGCAGGCGGC TATCTCGTGA TCGAAGACGC GCACGCCCGC
GTGCTGATGC ACGGCGTGCG GGCCGACCTC GAAGGCAAGG ACATGAGCGG CTTCACGGAT
CCGCAAGGGC GTCATGTGTT CAAGGACGGC TCCGATCTCG CCCAGCGCGA AGGCGAAGGC
TTCATCCACC TGCAATTCCT GAAACCGGGC TCCAACGAAA TGGCGCCGAA GATCAATTAC
GTGCGGCTGT ACAAGCCCTG GGACTGGACG ATCGTCACCG GCGTTTTCAC CGACGATATC
GACGCCGCGT TCTACACCAC GCTCGTCCAG TACGTAGGCG CCGCGTTGCT GCTGTGCCTG
GTGGTGTCGC TCGTGATCGG CGTGATCCTG CGCAGCATCT TGCGGCAACT CGGCGGCGAG
CCGGCATACG CGGCGCAGAT CGCCGCGCGC ATCGCCGACG GTGAGCTCGA CGTGATCGTG
GACACCAAGG CCGGCGACGA CACCAGCCTG CTCGCCGCGA TGCAGCGCAT GCAGCAGCGC
CTCGCACACG CGATCACACA GATTCGCGGC GGCGCGACGC TGATCTCGAC AGTCTCCAAC
GAAATCGCCG CCGGCAATGC GGACCTGTCG CGCCGCACCG AGCAGCAGGC CACTGCGCTC
GGCGAAACCG CGTCGAGCAT GGAGCAGATC ACCGCGACCG TGAAGCAAAA CGCCGACAAC
GCGAAGCAGG CGAGCCAGTT AGCGCATAAC GCGTCGGAGA CGGCGGCGCG CGGCGGCGAA
GTGGTCGACC AGGTGGTCGA GACGATGCGC GGCATTTCGC AGTCGTCGCA TCGGATCGGC
GACATCATCG GCGTGATCGA GGGGATTGCG TTTCAGACCA ATATTCTTGC TTTGAACGCG
GCGGTCGAAG CAGCGCGCGC CGGCGAGGAA GGACGAGGCT TCGCGGTGGT CGCGGGCGAA
GTGCGCAGCC TCGCGCAGCG CAGCGCGGCG GCCGCGAAGG AGATCAAGAC GCTGATCGAA
GAGTCCGCGG CGCAGATCGA AGGCGGCTCG CAGTACGTGA GCCGCGCCGG CGAAACCATG
CATGAAGTCG TGCAGGCGGT GCGGCGCGTG ACGGACATCA TGGGCGAGAT CAGCGCGGCT
TCGGTGGAGC AAAGCTCGGG CATCGAGCAG GTCAATATCG CGGTGGCGAG CATGGATCAG
ACGACCCAGC AGAACGCGGC GCTGGTGGAA GAAGCAAGCG CGTCGGCGGA TGTGCTGAAG
GCGCAGACCG GACAGCTCAG CGCGGCGATT GCCGTGTTCA CGCTGCCGGA AACTCGCTGA
 
Protein sequence
MERFRLKVRL WLALAVMCMG ILAIGLWGAF KTRDTMIADR QAELKSVVSV AYSVLDRYNG 
LVAAGSMPLA DAQRTAMADL RAMRYDGAGG YLVIEDAHAR VLMHGVRADL EGKDMSGFTD
PQGRHVFKDG SDLAQREGEG FIHLQFLKPG SNEMAPKINY VRLYKPWDWT IVTGVFTDDI
DAAFYTTLVQ YVGAALLLCL VVSLVIGVIL RSILRQLGGE PAYAAQIAAR IADGELDVIV
DTKAGDDTSL LAAMQRMQQR LAHAITQIRG GATLISTVSN EIAAGNADLS RRTEQQATAL
GETASSMEQI TATVKQNADN AKQASQLAHN ASETAARGGE VVDQVVETMR GISQSSHRIG
DIIGVIEGIA FQTNILALNA AVEAARAGEE GRGFAVVAGE VRSLAQRSAA AAKEIKTLIE
ESAAQIEGGS QYVSRAGETM HEVVQAVRRV TDIMGEISAA SVEQSSGIEQ VNIAVASMDQ
TTQQNAALVE EASASADVLK AQTGQLSAAI AVFTLPETR