Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4426 |
Symbol | |
ID | 6280502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 489193 |
End bp | 490320 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642615519 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001888172 |
Protein GI | 187919141 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.767277 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAACA CGCTGCATTA CGACGTCGCG ATTGCGGGCG GCGGCCTGGT CGGTTCATCG GCGGCATTGG CGCTCGCGAA GCGCGGCTTG CGCGTCGGCC TGTTCGAGCG GCGCTATTGC GGCGCGCAGG CAAGTGGCGT GAATTACGGC GGCGTGCGCT GTCAGGGACG GCCGGTCGAA CAGATGCCGC TCGCCATTCG CGCACGGCGC ATCTGGGACC GCTTGCCGGA GTTGATCGGC ATCGACGGCG AGTTCACGGT GTCGGGACAT TTGCGCCTCG CGCGTAGCGA AAGCGATCTC GCCGCGCTGC AGACGTGGGC CGACATGGCA CGCGATTTTG GACTGCACGC GCAACTCGTC AGCGGCGCGG CGTTCCGCCA GCGCTACCCG TGGCTCGGGC CGGCGGCGGT AGGCGGCTCG CTGTGCGCGA CCGACGGCCA TGCGAACCCG CGGCTGGTGT CGCCCGCCTT CGCGCGCGCA GCGCGGGCCG CCGGTGCGGA CGTGCGCGAG CAAACCGAAC TCACCGACAT TCATCACGAC GGCACGCGTT TTCAACTGCG CGCCGGCGAT CTGCGCGTCA GTGCCGACTG GCTCATCAAT TCGGCGGGCG CGTGGGCGAA TACGGTGGCC GGTTACTTCG GCGAAACCGC GCCGATGAAA CCGATCTACC CGAACATGTG GGTCACCGAA CCGCTGCCGC TTTTCATCAC GCACAACCTG GGCGTGTACG GCGGCGGCAT CTACGCGCGG CAAGTGGCGC GCGGCAATTG CGTGATCGGC GGCGGGCGCG GACATGGCGA CGGCGAATAC GGCCAGCCGT CGACGGACAC CACGCGCGCC GTGATGCGCG ACGCGTGCGC GCTGCTGCCC GCGCTGCGCG AGGCGCTGCT GATCCGTACG TGGAGCGGCG TGGAGGGCGA AACGCCCGAC AGCAATCCGA TCATCGGTGC GAGCCGTACC GTGCCGCGTC TGTTGCATGC ATTCGGTTTT TCAGGCGGCG GCTTCCTGCT CGCGCCGGGC GTCGGCGAAG TGCTCGCCGA TCTCGTCGCC GACGGCGCCA CCGTCACGCC ACTCGACGCT TTTTCGATTG GCCGTTTTGC TGCTGTCGCG ACCTCACCGG TCGCTTAA
|
Protein sequence | MSNTLHYDVA IAGGGLVGSS AALALAKRGL RVGLFERRYC GAQASGVNYG GVRCQGRPVE QMPLAIRARR IWDRLPELIG IDGEFTVSGH LRLARSESDL AALQTWADMA RDFGLHAQLV SGAAFRQRYP WLGPAAVGGS LCATDGHANP RLVSPAFARA ARAAGADVRE QTELTDIHHD GTRFQLRAGD LRVSADWLIN SAGAWANTVA GYFGETAPMK PIYPNMWVTE PLPLFITHNL GVYGGGIYAR QVARGNCVIG GGRGHGDGEY GQPSTDTTRA VMRDACALLP ALREALLIRT WSGVEGETPD SNPIIGASRT VPRLLHAFGF SGGGFLLAPG VGEVLADLVA DGATVTPLDA FSIGRFAAVA TSPVA
|
| |