Gene Bphyt_4426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4426 
Symbol 
ID6280502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp489193 
End bp490320 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content68% 
IMG OID642615519 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001888172 
Protein GI187919141 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.767277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACA CGCTGCATTA CGACGTCGCG ATTGCGGGCG GCGGCCTGGT CGGTTCATCG 
GCGGCATTGG CGCTCGCGAA GCGCGGCTTG CGCGTCGGCC TGTTCGAGCG GCGCTATTGC
GGCGCGCAGG CAAGTGGCGT GAATTACGGC GGCGTGCGCT GTCAGGGACG GCCGGTCGAA
CAGATGCCGC TCGCCATTCG CGCACGGCGC ATCTGGGACC GCTTGCCGGA GTTGATCGGC
ATCGACGGCG AGTTCACGGT GTCGGGACAT TTGCGCCTCG CGCGTAGCGA AAGCGATCTC
GCCGCGCTGC AGACGTGGGC CGACATGGCA CGCGATTTTG GACTGCACGC GCAACTCGTC
AGCGGCGCGG CGTTCCGCCA GCGCTACCCG TGGCTCGGGC CGGCGGCGGT AGGCGGCTCG
CTGTGCGCGA CCGACGGCCA TGCGAACCCG CGGCTGGTGT CGCCCGCCTT CGCGCGCGCA
GCGCGGGCCG CCGGTGCGGA CGTGCGCGAG CAAACCGAAC TCACCGACAT TCATCACGAC
GGCACGCGTT TTCAACTGCG CGCCGGCGAT CTGCGCGTCA GTGCCGACTG GCTCATCAAT
TCGGCGGGCG CGTGGGCGAA TACGGTGGCC GGTTACTTCG GCGAAACCGC GCCGATGAAA
CCGATCTACC CGAACATGTG GGTCACCGAA CCGCTGCCGC TTTTCATCAC GCACAACCTG
GGCGTGTACG GCGGCGGCAT CTACGCGCGG CAAGTGGCGC GCGGCAATTG CGTGATCGGC
GGCGGGCGCG GACATGGCGA CGGCGAATAC GGCCAGCCGT CGACGGACAC CACGCGCGCC
GTGATGCGCG ACGCGTGCGC GCTGCTGCCC GCGCTGCGCG AGGCGCTGCT GATCCGTACG
TGGAGCGGCG TGGAGGGCGA AACGCCCGAC AGCAATCCGA TCATCGGTGC GAGCCGTACC
GTGCCGCGTC TGTTGCATGC ATTCGGTTTT TCAGGCGGCG GCTTCCTGCT CGCGCCGGGC
GTCGGCGAAG TGCTCGCCGA TCTCGTCGCC GACGGCGCCA CCGTCACGCC ACTCGACGCT
TTTTCGATTG GCCGTTTTGC TGCTGTCGCG ACCTCACCGG TCGCTTAA
 
Protein sequence
MSNTLHYDVA IAGGGLVGSS AALALAKRGL RVGLFERRYC GAQASGVNYG GVRCQGRPVE 
QMPLAIRARR IWDRLPELIG IDGEFTVSGH LRLARSESDL AALQTWADMA RDFGLHAQLV
SGAAFRQRYP WLGPAAVGGS LCATDGHANP RLVSPAFARA ARAAGADVRE QTELTDIHHD
GTRFQLRAGD LRVSADWLIN SAGAWANTVA GYFGETAPMK PIYPNMWVTE PLPLFITHNL
GVYGGGIYAR QVARGNCVIG GGRGHGDGEY GQPSTDTTRA VMRDACALLP ALREALLIRT
WSGVEGETPD SNPIIGASRT VPRLLHAFGF SGGGFLLAPG VGEVLADLVA DGATVTPLDA
FSIGRFAAVA TSPVA