Gene Bphyt_4372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4372 
Symbol 
ID6279228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp429140 
End bp429955 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content62% 
IMG OID642615466 
ProductABC transporter related 
Protein accessionYP_001888119 
Protein GI187919088 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4525] ABC-type taurine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.214252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA TGACTGTCAG GAACGTGAGC GTGGTATTTC CGGGGCGGCG CCCCGGCCAG 
ACCGTGCAGG CGCTCGACGA TATCAACCTG ACCATCCGCT CGGGTGACTT CGTGGTCGCG
CTGGGTGCGT CGGGCTGCGG CAAGACCACG CTGTTATCGC TGATGGCCGG TTTCATCGCG
CCGAGCCGCG GCGAGTTGCT GCTCGGCGGC GAACCTATTG CGGGGCCGGG GGCGGACCGC
GGCGTGGTGT TCCAGAAGCA TGCGCTGTTG CCATGGCTCA ACGTGATCGA CAACGCGGAA
TTCGGCCTCA AGCTGCAAGG CGTGCCACGC GCGCAACGGC GCGAAATTGC CGTGCGCAAT
CTTGCGCTGG TGGGCTTGCA GGACTTCCAC AAGCACATGA TCTACCAGCT CTCCGGCGGC
ATGCAGCAGC GCGTCGGGAT TGCCCGCGCG CTCACCTGCG ATCCGGCGAT GCTGCTGATG
GACGAGCCGA TGGCCGCGCT CGACGCGCTC ACTCGCGAGA CCATTCAGGA GCTTCTGCTC
GACGTGTGGA AGAAGACCAA CAAGATGTTC TTCTTCATCA CGCACAGTGT GGAGGAAGCA
CTGTTCCTTG CGAGCCGGCT CATCGTGATG TCGCCGCGTC CCGGCCGTAT CACGCATACC
TACGAACTGG ACTTCAACCG CCGTTTTCTC GAATCGCGCG ACGCACGGGC GATCAAATCG
AGTCCCGATT TCATCGCAAT GCGCGAGCAG GTTCTCAACA TCATCTACGG CGACGAGAAA
ATGCATGCCG CCGAGGCCGG AGTCGCTCAT GTTTAG
 
Protein sequence
MENMTVRNVS VVFPGRRPGQ TVQALDDINL TIRSGDFVVA LGASGCGKTT LLSLMAGFIA 
PSRGELLLGG EPIAGPGADR GVVFQKHALL PWLNVIDNAE FGLKLQGVPR AQRREIAVRN
LALVGLQDFH KHMIYQLSGG MQQRVGIARA LTCDPAMLLM DEPMAALDAL TRETIQELLL
DVWKKTNKMF FFITHSVEEA LFLASRLIVM SPRPGRITHT YELDFNRRFL ESRDARAIKS
SPDFIAMREQ VLNIIYGDEK MHAAEAGVAH V