Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4372 |
Symbol | |
ID | 6279228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 429140 |
End bp | 429955 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642615466 |
Product | ABC transporter related |
Protein accession | YP_001888119 |
Protein GI | 187919088 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4525] ABC-type taurine transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.214252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAACA TGACTGTCAG GAACGTGAGC GTGGTATTTC CGGGGCGGCG CCCCGGCCAG ACCGTGCAGG CGCTCGACGA TATCAACCTG ACCATCCGCT CGGGTGACTT CGTGGTCGCG CTGGGTGCGT CGGGCTGCGG CAAGACCACG CTGTTATCGC TGATGGCCGG TTTCATCGCG CCGAGCCGCG GCGAGTTGCT GCTCGGCGGC GAACCTATTG CGGGGCCGGG GGCGGACCGC GGCGTGGTGT TCCAGAAGCA TGCGCTGTTG CCATGGCTCA ACGTGATCGA CAACGCGGAA TTCGGCCTCA AGCTGCAAGG CGTGCCACGC GCGCAACGGC GCGAAATTGC CGTGCGCAAT CTTGCGCTGG TGGGCTTGCA GGACTTCCAC AAGCACATGA TCTACCAGCT CTCCGGCGGC ATGCAGCAGC GCGTCGGGAT TGCCCGCGCG CTCACCTGCG ATCCGGCGAT GCTGCTGATG GACGAGCCGA TGGCCGCGCT CGACGCGCTC ACTCGCGAGA CCATTCAGGA GCTTCTGCTC GACGTGTGGA AGAAGACCAA CAAGATGTTC TTCTTCATCA CGCACAGTGT GGAGGAAGCA CTGTTCCTTG CGAGCCGGCT CATCGTGATG TCGCCGCGTC CCGGCCGTAT CACGCATACC TACGAACTGG ACTTCAACCG CCGTTTTCTC GAATCGCGCG ACGCACGGGC GATCAAATCG AGTCCCGATT TCATCGCAAT GCGCGAGCAG GTTCTCAACA TCATCTACGG CGACGAGAAA ATGCATGCCG CCGAGGCCGG AGTCGCTCAT GTTTAG
|
Protein sequence | MENMTVRNVS VVFPGRRPGQ TVQALDDINL TIRSGDFVVA LGASGCGKTT LLSLMAGFIA PSRGELLLGG EPIAGPGADR GVVFQKHALL PWLNVIDNAE FGLKLQGVPR AQRREIAVRN LALVGLQDFH KHMIYQLSGG MQQRVGIARA LTCDPAMLLM DEPMAALDAL TRETIQELLL DVWKKTNKMF FFITHSVEEA LFLASRLIVM SPRPGRITHT YELDFNRRFL ESRDARAIKS SPDFIAMREQ VLNIIYGDEK MHAAEAGVAH V
|
| |