| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4351 |
|---|
| Symbol | |
|---|
| ID | 6277633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 405979 |
|---|
| End bp | 406653 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642615445 |
|---|
| Product | NAD(P)H dehydrogenase (quinone) |
|---|
| Protein accession | YP_001888098 |
|---|
| Protein GI | 187919067 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCT TGCTGATCAA TGCCAGCCCG CATGGTGAAG CGAGCCACGG CTACCGTTTC
GCCGACGAAA TCGTCGGCAT GCTGCACGGG CACGCCGCAC CCGCCGCCTC GGCCATCACC
GTGGTCGAGC GCGACCTGGC GGCCGCGCCG CTGCCGCCGA TCGCCCGCGA TTACGCACGC
GCCGTCACGT CGCGCGCGCC GGATACGGCG CATTTCGATG TCTCCGAGCA ACTGATCGGT
GAAATCGAAA CCACGGATGC GCTCATCATC AACACGCCGA TGCACAACTT CACGGTCCCG
GCAGCGCTCA AGCTGTGGAT CGATTACACG CTGCGCATTC ATCGCACGTT CGCCTCGACG
CCGGAGGGCA AGGTTGGACT GATGCGCGAC CGGCCGACCA TCGTGATCGT CGGTTCGGGC
GGTGTGCATA GCGGCGAACG CGCGCGGCAG ACGGATTTCC TGACCCCGTA TCTGCGCTAC
GCGCTCGGCT CGATCGGCAT TCACAGCGTG CAGTTTCTTC TTTTGCAGGG GCTCGTGATG
GGCGAAGCGA CTGTGGCCAA AGCGCTCGAT GCGGCGCGCG TTCAGCTTAC CGGCGACGCA
GTGTTCGTCT CGCTTGCCGC GCAGGCTTCC CGATGCGCGA GGACGGCGGC CGGTAGTACT
GCACGGAGCG CATAG
|
|---|
| Protein sequence | MRILLINASP HGEASHGYRF ADEIVGMLHG HAAPAASAIT VVERDLAAAP LPPIARDYAR
AVTSRAPDTA HFDVSEQLIG EIETTDALII NTPMHNFTVP AALKLWIDYT LRIHRTFAST
PEGKVGLMRD RPTIVIVGSG GVHSGERARQ TDFLTPYLRY ALGSIGIHSV QFLLLQGLVM
GEATVAKALD AARVQLTGDA VFVSLAAQAS RCARTAAGST ARSA
|
|---|
| |