Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4349 |
Symbol | |
ID | 6278462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 403391 |
End bp | 404143 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642615443 |
Product | NmrA family protein |
Protein accession | YP_001888096 |
Protein GI | 187919065 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.971724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.637435 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCG TCGTAATCGG TGGGTCCGGC CTGATCGGAT CGCGTCTTGT CACGCTGCTG GGCGAAGCAG GCCATGAAGC GGTCGCTGCG TCGCCGCGTA CTGGTGTCAA CGCTGTGACC GGCGAGGGTC TGAGCAATGC GCTCGTGGGC GCGGACGTCG TAATGGATGT GACAAACGCG CCGTCATGGG AGCCGCAGGC GGTACTCGAC TTCTTCCGCA CTTCGGCGCG CAATCTTGGC AAGGCCGAAG CGGCTGCGGG AGTGCGCCAT CACGTGGCGC TCTCCATCGT CGGCTGCGAC CGCTCGCCGA AGAACGCGTA TTTCGCTGCC AAGGTCGCGC AGGAGGAATT GATCCGGGCA GCCGGCGTGC CGTACACGAT CGTGCGCGCG ACGCAGTTCA TGGAGTTCAT CGGCGGTATC GCGGATTTCA GCACGGTCGA CGGCACGGTG CGTATCGGCG AAGGACTGTT TCAACCGATC GCCGTGGATG ACGTCGTCGC CAACCTTGCG CAGGTCGCGC TCGCTGCGCC GCAAAACGGC ACGGTCGAGA TTGCCGGCCC GGACCGCGCA CCCTTCGCGG AGATCGTCTC GCGTTTTCTG AAGTCGGTGG GCGACGCGCG CCCGGTGGTG ACGGATCGCG ATGCGCTGTA TTACGGCGAC CGCGTCGAGG AACAATCGCT CGTGCCGCTC GGCGATGCAC GGATTGGCCG CGTCAGTCTC GACCAGTGGT TCGCGCGCGC AAAGAACGGT TGA
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Protein sequence | MKIVVIGGSG LIGSRLVTLL GEAGHEAVAA SPRTGVNAVT GEGLSNALVG ADVVMDVTNA PSWEPQAVLD FFRTSARNLG KAEAAAGVRH HVALSIVGCD RSPKNAYFAA KVAQEELIRA AGVPYTIVRA TQFMEFIGGI ADFSTVDGTV RIGEGLFQPI AVDDVVANLA QVALAAPQNG TVEIAGPDRA PFAEIVSRFL KSVGDARPVV TDRDALYYGD RVEEQSLVPL GDARIGRVSL DQWFARAKNG
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