Gene Bphyt_4349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4349 
Symbol 
ID6278462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp403391 
End bp404143 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content65% 
IMG OID642615443 
ProductNmrA family protein 
Protein accessionYP_001888096 
Protein GI187919065 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.971724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.637435 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG TCGTAATCGG TGGGTCCGGC CTGATCGGAT CGCGTCTTGT CACGCTGCTG 
GGCGAAGCAG GCCATGAAGC GGTCGCTGCG TCGCCGCGTA CTGGTGTCAA CGCTGTGACC
GGCGAGGGTC TGAGCAATGC GCTCGTGGGC GCGGACGTCG TAATGGATGT GACAAACGCG
CCGTCATGGG AGCCGCAGGC GGTACTCGAC TTCTTCCGCA CTTCGGCGCG CAATCTTGGC
AAGGCCGAAG CGGCTGCGGG AGTGCGCCAT CACGTGGCGC TCTCCATCGT CGGCTGCGAC
CGCTCGCCGA AGAACGCGTA TTTCGCTGCC AAGGTCGCGC AGGAGGAATT GATCCGGGCA
GCCGGCGTGC CGTACACGAT CGTGCGCGCG ACGCAGTTCA TGGAGTTCAT CGGCGGTATC
GCGGATTTCA GCACGGTCGA CGGCACGGTG CGTATCGGCG AAGGACTGTT TCAACCGATC
GCCGTGGATG ACGTCGTCGC CAACCTTGCG CAGGTCGCGC TCGCTGCGCC GCAAAACGGC
ACGGTCGAGA TTGCCGGCCC GGACCGCGCA CCCTTCGCGG AGATCGTCTC GCGTTTTCTG
AAGTCGGTGG GCGACGCGCG CCCGGTGGTG ACGGATCGCG ATGCGCTGTA TTACGGCGAC
CGCGTCGAGG AACAATCGCT CGTGCCGCTC GGCGATGCAC GGATTGGCCG CGTCAGTCTC
GACCAGTGGT TCGCGCGCGC AAAGAACGGT TGA
 
Protein sequence
MKIVVIGGSG LIGSRLVTLL GEAGHEAVAA SPRTGVNAVT GEGLSNALVG ADVVMDVTNA 
PSWEPQAVLD FFRTSARNLG KAEAAAGVRH HVALSIVGCD RSPKNAYFAA KVAQEELIRA
AGVPYTIVRA TQFMEFIGGI ADFSTVDGTV RIGEGLFQPI AVDDVVANLA QVALAAPQNG
TVEIAGPDRA PFAEIVSRFL KSVGDARPVV TDRDALYYGD RVEEQSLVPL GDARIGRVSL
DQWFARAKNG