| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4291 |
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| Symbol | |
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| ID | 6278937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 339621 |
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| End bp | 340772 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642615385 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001888038 |
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| Protein GI | 187919007 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.407078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.139177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CCCTCATCGC AGCAGGTCTC CTCAGCGCGG TTGCCATCAG CGCCCATGCA
CAGAGCAGCG TGACCTTGTA CGGCACGCTG GACGCAGGCC TCGTCTACTC GAACAACCAG
GGCGGCCATA GCAACTGGCA GCAAGGCAGC GGCTCGGTGT CGAACACCTA CTTCGGGCTG
CGCGGCAGTG AAGACTTCGG CGGCGGCCTG CATGCGATCT TCACGTTGGA GAACGGCTTC
AACCTGAATA ACGGGCAGAA CACGGAAAGC AACACGATGT TCAACCGTCA GGCCTTCGTC
GGTCTGCAGA GCGATCAGTA CGGTGCGCTG ACGCTTGGCC GTCAATACGA CTCCGTGGTC
GACTACCTGG CGCCGCTGTC CGAAGCAGGC GCGGGCTACG GCAACAACTT GGCGGCTCAC
CCGCTCGATA ACGACAACCT CGACAACTCG TTCTCGATCA AGAACGCCGT CAAGTACACG
AGCGCGAATT ACGCGGGTCT GAAGTTCGGC GGCCTGTATG GCTTCAGCAA CTCGGCCGGC
GATTTCTCCA ACAACCGCGC GTGGAGCGTC GGCGCTTCGT ACGACAACGG TCCGTTGAGC
GTTGCCGCCG CTTACCTGCA ACTGAACCAG TCGGGCAGTT CTAACCTGAG CGGCGCGGTG
TCGCAAGGCG ACGGCACCGC GGCGGTCGCG GCCAATCTGC AACGCACGTA CGGCGCGGGC
ATCAATTACA CGTACGGCCC GGCAACGGTC GGCTTCGTCT ATACGCATAC GCAGCTCGAC
GGCATCACCG GCGTGGACGT CGGCGGCACG ACGCTGCCTG GCGTCGCCGG CACAAACCTG
CACCTGGACA ACTACGAAGT GAACGGCCGC TATGCGCTGA CGCCGGACCT CAGCCTCGCG
GCGTCGTACA CGTTCACCGA CGGCAAGATG TCCGGCTCGA ACGGCTCGGG CGATCCGAAA
TGGCACACGG TATCGCTGCA AGGCGACTAC TCGCTCAGCA AGCGCACCGA TGTGTACGTG
GAAGGTGTGT ATCAGCATGC CTCGGGCGAA CTCGGCAACT TCGGTTCGAA TGTCGCGGCG
ATCAACACGC TCGCGCCATC GTCGACCGGC AATCAGGTGG CGGCGGCAGT CGGCTTGCGT
CACCGCTTCT AA
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| Protein sequence | MKKTLIAAGL LSAVAISAHA QSSVTLYGTL DAGLVYSNNQ GGHSNWQQGS GSVSNTYFGL
RGSEDFGGGL HAIFTLENGF NLNNGQNTES NTMFNRQAFV GLQSDQYGAL TLGRQYDSVV
DYLAPLSEAG AGYGNNLAAH PLDNDNLDNS FSIKNAVKYT SANYAGLKFG GLYGFSNSAG
DFSNNRAWSV GASYDNGPLS VAAAYLQLNQ SGSSNLSGAV SQGDGTAAVA ANLQRTYGAG
INYTYGPATV GFVYTHTQLD GITGVDVGGT TLPGVAGTNL HLDNYEVNGR YALTPDLSLA
ASYTFTDGKM SGSNGSGDPK WHTVSLQGDY SLSKRTDVYV EGVYQHASGE LGNFGSNVAA
INTLAPSSTG NQVAAAVGLR HRF
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