| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4275 |
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| Symbol | |
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| ID | 6277881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 324705 |
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| End bp | 325298 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642615369 |
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| Product | autoinducer synthesis protein |
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| Protein accession | YP_001888022 |
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| Protein GI | 187918991 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.722573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.550742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAG CAATCCGGAT TGGAATGCGT CAGGAATTCG ACAACGCGGA CATTAACGAG
ATGTACCGCC TGCGGGCGCG AGTATTTCAT GGGCGGCTCG GGTGGGATAT TCCGACCATC
GCGGGCATGG AGATCGACGG CTATGACGCG CTCGGGCCGC ACTACATGCT GATCCAGGCC
GACGACGGGC AAGTGCGCGG CTGTTGGCGC CTGATGCCGA CCGAGGGCCC CAACATGCTG
AAGGACACCT TCCCGCAGTT GCTGCATGGC GCGGCCGCGC CGGTTGGGCG GCACATCTGG
GAACTGAGCC GGTTCGCGAT CGAAACCGGC GGTGAGGAAC AGTCGTTCGG CTTTGCTGAC
CTCACCATGC AGGCGATTCA CGAACTGGTG ACGTTCGCCG ACCAGATGGG CATCACGCGG
TATGTCACCG TGACCACCAC GCCGATCGAG CGGCTGCTGC GCAAAACCGG CATCGACATC
AGCCGGCTCG GGTCGCCATT GCAGATCGGT GTGGAGCGAG CGGTGGCGCT GGATATCGCG
GTGAGTCCGA AGACTCGCAC CGCGCTGTTC GGACCGATGG CCGTTGCTGC CTAG
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| Protein sequence | MQTAIRIGMR QEFDNADINE MYRLRARVFH GRLGWDIPTI AGMEIDGYDA LGPHYMLIQA
DDGQVRGCWR LMPTEGPNML KDTFPQLLHG AAAPVGRHIW ELSRFAIETG GEEQSFGFAD
LTMQAIHELV TFADQMGITR YVTVTTTPIE RLLRKTGIDI SRLGSPLQIG VERAVALDIA
VSPKTRTALF GPMAVAA
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