Gene Bphyt_4271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4271 
Symbol 
ID6280506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp320572 
End bp321891 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content62% 
IMG OID642615365 
Productprotein of unknown function DUF323 
Protein accessionYP_001888018 
Protein GI187918987 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03440] conserved hypothetical protein TIGR03440 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.728513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.506774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCG ACCCCGCCCC GCATCACCCG CTCGTGCAGC GCCTGATCGA AGCGCGTCAA 
GTGACTGACG CACTGTTTTC CATCGTCAAA CCCGAGTTTC TGTACGAACG GCCGATCCGC
GAGCGCCACC GGATCGTGTT CTACATCGGC CATCTGGAGG CTTTCGATCG TAATCTGTTC
GATCAACGCC TCTGCGATCT GCCGGCGTTC GATCCACAGC TCGACCAGCT TTTTGCCTTC
GGCATCGATC CCGTCGACGG CGGTTTTCCG ACCGATCAAC CAGGTGACTG GCCATCGCTC
GACGTCGTGC GCAGCTACGG CTTGCGTGCG CGCGAGCAGA TCGACCGCGA GCTCGATGCG
CTAACGCACG CCGCGGGACT CGGCCGCAAC GGCGCGCAAG CCGACGCCTC CGAGCAATTG
CTGAACGTGG CGATCGAGCA TCGGTTGATG CATGCTGAAA CGCTGGCGTA CATGCTTCAT
CAGTTACCGC TGGCGCAGAA GGTCACCGAA TTGCGCGAGC CTGTCGTGAC GCGCGCGGAA
TCGCGGGACG CGTTGTCGTC GATGGTCAGC ATACCGGCCG GCGCAACGGT GCTCGGCATG
CCACGTGACG GCGGACGCTT CGGGTGGGAC AACGAGTTCG GCGAAATGCG GGTCGAAGTG
CCGGCCTTCG AAATGGACCG CCATATGGTG ACGAATGGCG CGTTCCGCGA GTTCATCGAG
GCAGGCGGCT ATCGCGAACC GAAGTGGTGG TCGGAGAAGG ATTGGGCGTG GAAGGAGGCC
GAGCACATCG AGCATCCCGC GTGCTGGTCG CGGCACGAGG CCGGCGGCGA AGGTGACGCA
TGGACGTTGC GCACCATGTT CGACGAAGTG CCGCTGCCGC TCGACTGGCC CGCGTATGTG
AGCCACGCCG AAGCCAGCGC GTACGCACGG TGGGCAGGCA AAGCATTACC GACCGAGGCG
CAATGGCAAC GTGCGGCACA CGGCGCGCCG CACGCCGCGT CGGGCAATTT CGACTTTCGC
AGCTGGGATC CGCGACCTGT CGATGAGTAT CCGGACAATG TCAGCGCGTT CGGCGTGGAA
GGTCAATTCG GCAATGGCTG GGAGTGGACC TCGACGGTGT TCGATGCGCT GCCCGGCTTC
GAAGCTTTTC CGTTCTATCT AGGCTATTCG GCCAACTTTT TCGATGGTCA GCACTATGTG
ATCAAAGGTG GATCGGCGCG CACCGCGCAA TGCATGCTGC GGCCGGCTTT CCGGAATTGG
TTTCAGCCGC ATTACCAGTA TGTGTATGCG GGGTTTCGGT GTGTGAGGTC ATGTGAATAA
 
Protein sequence
MNRDPAPHHP LVQRLIEARQ VTDALFSIVK PEFLYERPIR ERHRIVFYIG HLEAFDRNLF 
DQRLCDLPAF DPQLDQLFAF GIDPVDGGFP TDQPGDWPSL DVVRSYGLRA REQIDRELDA
LTHAAGLGRN GAQADASEQL LNVAIEHRLM HAETLAYMLH QLPLAQKVTE LREPVVTRAE
SRDALSSMVS IPAGATVLGM PRDGGRFGWD NEFGEMRVEV PAFEMDRHMV TNGAFREFIE
AGGYREPKWW SEKDWAWKEA EHIEHPACWS RHEAGGEGDA WTLRTMFDEV PLPLDWPAYV
SHAEASAYAR WAGKALPTEA QWQRAAHGAP HAASGNFDFR SWDPRPVDEY PDNVSAFGVE
GQFGNGWEWT STVFDALPGF EAFPFYLGYS ANFFDGQHYV IKGGSARTAQ CMLRPAFRNW
FQPHYQYVYA GFRCVRSCE