Gene Bphyt_4265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4265 
Symbol 
ID6279043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp312409 
End bp313455 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content51% 
IMG OID642615360 
Productporin Gram-negative type 
Protein accessionYP_001888013 
Protein GI187918982 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.505475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAACC AAGCAACGTC AATGGCCATT GGATTGTGTG CTTCCATCGT TCTGGCATGT 
ACGTCGCAAG CGACGATGGC GCAGAGTAGC GTGACTCTTT ACGGAATTTT GGATGTGAGC
GTTCAGCTTA CAACGCGCGC GGACGGACAG CATTCCGCAA TTAATCTTCA AAACTATGGG
AGCGTACCTA CGATCTTTGG GTTACATGGG TCAGAGGATT TGGGCGGGGG GGTATCTGCA
ATATTTGAGC TCTCTCAATC ATTTAGTATG ACTAATGGAA AATCAGGAAT CCCGGGTGAT
GCATTTGGGT GGCAGAGCTA TGTCGGCCTC AAAGGGGGCT TTGGAACTGT GACGGCTGGA
CGACAGTTTT CTGTTCTCTT TGACGAGACA GTAATGTTTG ATCCGACCTA CTTCGCCGCA
TATGGTGGGC AGGCACAGCT CAATCCGCTA TCGGACATTA TTGTGAACAA CTCGATAAAG
TATCTATCGA ACAGCTATGG CGGCTTCGTC TTCGAGGGGT TGATATCGAC CGATGGTGTT
GCAGGAAATT TCGCATCTGG GCGTACCCTG GAACTTGGAA TGCAATACAG CCGCGGCCCG
TTTAATATGA GTGTGGCTCT GCGGGAGAAA AATGGTTCAG AGATGGAAAC CGCAGGCAGC
TCGGGGAAGA CTGAGAGGAT CGGTGTGATT GGCGCTGCGT ATAAGATCGG CCCCGCAACG
CTACTCGCGG GTGTCGAGCG CACGACCGGA GATTTGTCAC CTGTCAAAAC GGTTATTTGG
GGCGGGGGTC GCTACGATGT CACACCGGCT CTCCAATTCC GGGCTGCCGT CTATCAGACG
CTTTCAAAAA ATCCGCAGAC TGGCGATCCA ACGTTATATG TCGCAGGGGC TGTCTATTCG
CTATCCGTTC GTACACAAAC TTACCTGAAT GTTGGGTACT CCAGGAACTC TGCTCATAGT
TCTCAGACGG TTTATGAATA TGGTGATGCT CCACTTAATG GAGCGAATCA GTTCGCGGTG
ATGTTGGGGA TTACACATAA ATTCTGA
 
Protein sequence
MCNQATSMAI GLCASIVLAC TSQATMAQSS VTLYGILDVS VQLTTRADGQ HSAINLQNYG 
SVPTIFGLHG SEDLGGGVSA IFELSQSFSM TNGKSGIPGD AFGWQSYVGL KGGFGTVTAG
RQFSVLFDET VMFDPTYFAA YGGQAQLNPL SDIIVNNSIK YLSNSYGGFV FEGLISTDGV
AGNFASGRTL ELGMQYSRGP FNMSVALREK NGSEMETAGS SGKTERIGVI GAAYKIGPAT
LLAGVERTTG DLSPVKTVIW GGGRYDVTPA LQFRAAVYQT LSKNPQTGDP TLYVAGAVYS
LSVRTQTYLN VGYSRNSAHS SQTVYEYGDA PLNGANQFAV MLGITHKF