| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4252 |
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| Symbol | |
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| ID | 6279214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 298832 |
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| End bp | 300139 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642615348 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_001888001 |
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| Protein GI | 187918970 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0238128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCGA TGACCGATCG TGACTGGCTG GATTTCCTGG CCGCCCGTCG CAACGGCGAC
GACCCGTCTG CACTATTGAG CGCGGCGTCC GCCCCTGTGC GTTTCATTCT GTCGCGCCAT
CTGGAAGGCG CGGAGATTTC CCGCGACGAA GGACGAGTCC TGTTCGAGGC CGATGGCGAA
GACCTCAAGG CGGTGGTCGC CACCGCCGAC CATGTACGGC GCGAGCGCGT TGGCGACGTC
GTCAGCTTTG TGGTCACCCG CAATATCAAC TTCACCAACG TCTGCTACAT GGGGTGCCGC
TTCTGCGGCT TTGCCAAGCG GCGCGAGGAG GAGGGCGCGG AACTGCTGTC GATGGACGAA
GTGGCAAGGC GCGCGGATGT GGCCAGGCAG CGCGGCGCCA CCGAGGTCTG TATCCAGGGT
GGACTGCATC CAGACCTGAC GGATCACCAT TATCTCGACA TCCTCGCGGC GATCAAGGCG
CGAGTGCCCG AGATGCATAT CCACGCATTC TCGCCGTTCG AGATATGGTA CGGCTCGAAA
AAGCGCCGCC AGGCGGCCGC CGACTACCTG CGCGAGCTTA AGGCCGCCGG TTTGGGTTCT
ATTCCAGGAA CGGCGGCGGA GATTCTCGAT ACCGATGTGC GCCGTCAGCT GACGCGCAAC
AAGTTGTCCG CCCAGGCGTG GGTGGAAATC GTCCGTGCCG CGCATGGCGT GGGCCTGCGC
AGTACGTCGA CCATGATGTA CGGGCACGTG GATGGGCCCG GCCATTGGGC CGCGCATATC
GACCTGCTGC GCAGCATCCA GAAGGAGACT GGGGGCTTCA CCGAATTTGT GCCACTGGGC
TTCGTGCACA GCGAGGCGCC GCTGTACATG GAGCACGAGA TCCCTGGCGT GCGTGCCGGT
GCCACGCTGG TCGAGCATAT CAAGGTGCAC GCGATCGCCC GCCTGATGCT GGCGGGTTGG
ATCGACAACA TTCAGGTGTC GTGGGTCAAG CTAGGACCGC AGACAGGGCA GGCGCTGCTG
GCTGCCGGCG CCAACGACTT TGGCGGCACG CTGATGGACG AATCGATCTC CCGGTCGGCG
GGCGCGTCGT TCGGGGAGGA AATCACGGCG GCCGAGATGG TGAGCATTAT CCGCGACGCC
GGGCGCGAGC CGGTGCGCCG CAGCACGTTG TACGTCCCAC TCGAGCGCTA CGTCGACCAT
GATCCGGTGG CGCTGCCGCC GCTGAAGGCG CGTGCCTATG ATCCGATCCG GTTTTTGCGC
AACCGGCCGC AGGCAGGATG CGACAACGAG GAGCTCGCTC ATGCGTGA
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| Protein sequence | MNAMTDRDWL DFLAARRNGD DPSALLSAAS APVRFILSRH LEGAEISRDE GRVLFEADGE
DLKAVVATAD HVRRERVGDV VSFVVTRNIN FTNVCYMGCR FCGFAKRREE EGAELLSMDE
VARRADVARQ RGATEVCIQG GLHPDLTDHH YLDILAAIKA RVPEMHIHAF SPFEIWYGSK
KRRQAAADYL RELKAAGLGS IPGTAAEILD TDVRRQLTRN KLSAQAWVEI VRAAHGVGLR
STSTMMYGHV DGPGHWAAHI DLLRSIQKET GGFTEFVPLG FVHSEAPLYM EHEIPGVRAG
ATLVEHIKVH AIARLMLAGW IDNIQVSWVK LGPQTGQALL AAGANDFGGT LMDESISRSA
GASFGEEITA AEMVSIIRDA GREPVRRSTL YVPLERYVDH DPVALPPLKA RAYDPIRFLR
NRPQAGCDNE ELAHA
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