| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4240 |
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| Symbol | |
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| ID | 6280067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 284936 |
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| End bp | 286489 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642615337 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_001887990 |
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| Protein GI | 187918959 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCTT ACGCACCACC ATCGGCGGCA CACGTACCTG CGAACAACAA GATCTCGGCC
AACGACTGTG AAGCGACAAC ATTGTCCATT GCATCCTCGC CTAGACGTGA ATGGACGCTG
CTGGAACTAC TGCGGATCGA GCGTCAACGA GGTGTGAGCC TTGTCAAGCA GATCGTTGCC
AGCCTCGACG CCTTGGTCGA CTCGGGGCGG CTCCGTCCGG GAACGAAGAC ACCGTCGGTG
CGGGAGCTTG CAAAATCCCT TGACGTCAGC ACCTTTACAG TGGCCGAGGC ATACGATGTG
CTGGTCTCCC GGGGCGTACT GAGTTCGCGG CCCGGCTCCG GGTACTTCGT CACTTCGCGC
GCCGCGCACG TGACAGCATT GCTGGATGAG CCGCCGAAAA GAAAGGAAGC GGCCTCAGGC
TCATGGCTGC CGGTGCTGGT GTGGAACCAG GACCCGGACC TGCAGCCGGT TGGTTCCGGT
GTGCTTCCGC CGGAGTGGTG TAGCGAGAGC ACGCTGCTAC AGGCGGTCAG GCAGGCCATC
AAGATGCCCG CTGAGCGTCT GGTCGGCTAC GGTCATCCGC TCGGCTTCCA GCGCCTCCGC
CAATTGCTCG CCCGCGGATT TACCGAGCGA TTCTGCCCTG TCTCGCCGGA GCAGATCATT
CTCACGAACG GGGTATCGCA CGGTCTCGAC CTTGTCGTCC GAACCATTCT GCAGCCAGGT
GACACGGTAT TTGTCGAAGA GCCCGGTTAC TTCAACACCA ACCATCTTCT GCGCAGCCAC
GGCGTGCGCA TGCTTGGCGT TCCTCGGGGA GCGGATGGAC TGCACGTCGA TAAGCTGGCC
GCGATGGCCG CGGAGCACCG GCCCAAGGCG ATTTTTCTCA GTTCGGTCTT GCAGAATCCA
CTTTCGTCCA CTTTGCCGGC TTCGCAGGCC TACCGGGTCA TCGCGTTGGC CGAGCAATAC
GATTTCCTCA TCGTCGAAGA CGATATCTAT CGCGATCTCG CTTCGCCTTC GGACCCCTCC
TTGACATCAC TGGATGGGTT GAATCGTGTG ATCTGCCTGG GCGGCTTCTC CAAGACTATC
GCCCCATCCT TGCGAACAGG ATTCATTCTT TGCCCTGATC ATCTGGTTTC CGGTATCGTC
CGGACGAAGA TGGCATCCGG CCTGACGACA TCGGAATTGA ATGAGCGATG CATATATGAG
GTCTTGGCAG ATCCGGGCCA CCGCCGTTAT ATCGATCGAC TGCGGATGCG CCTCGCAAAC
GACCGCGAGC AATTTCTTTC GTTTCTGTCC GAAGTCGGCA TAACCCCTCT CGCCACGCCC
CGCGGTGGAC TCTTCGTCAG TGCCGGATGG CGAATCCAGC CAACCGCCCA GTTCAATGCG
GAACTGATCA CAGCAGAAGC CAGGGCGGCA AAGATTGCCC TCGTCGGAGG TGATTTATTT
ATGCTCTCGC CATCCACGGA CAGCGTCTGG TTTCGCTTTA ATGTCGCTTA TTGTGGTTCG
CCGGAACTCC AGCACTTTCT CCGAGGCATC TCCGCGCGTG TGCCGAAGGC GTGA
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| Protein sequence | MIAYAPPSAA HVPANNKISA NDCEATTLSI ASSPRREWTL LELLRIERQR GVSLVKQIVA
SLDALVDSGR LRPGTKTPSV RELAKSLDVS TFTVAEAYDV LVSRGVLSSR PGSGYFVTSR
AAHVTALLDE PPKRKEAASG SWLPVLVWNQ DPDLQPVGSG VLPPEWCSES TLLQAVRQAI
KMPAERLVGY GHPLGFQRLR QLLARGFTER FCPVSPEQII LTNGVSHGLD LVVRTILQPG
DTVFVEEPGY FNTNHLLRSH GVRMLGVPRG ADGLHVDKLA AMAAEHRPKA IFLSSVLQNP
LSSTLPASQA YRVIALAEQY DFLIVEDDIY RDLASPSDPS LTSLDGLNRV ICLGGFSKTI
APSLRTGFIL CPDHLVSGIV RTKMASGLTT SELNERCIYE VLADPGHRRY IDRLRMRLAN
DREQFLSFLS EVGITPLATP RGGLFVSAGW RIQPTAQFNA ELITAEARAA KIALVGGDLF
MLSPSTDSVW FRFNVAYCGS PELQHFLRGI SARVPKA
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