Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4231 |
Symbol | |
ID | 6279375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 274599 |
End bp | 275753 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642615329 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_001887982 |
Protein GI | 187918951 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAA GCACAGCCTT GGGTCGCGGC ATGGCGACTG TCGGCATTCT GGGTACATTG GCGGCGGCTG CCGTGGGCGC CGCCCGTGCC GACGAGATGG TGAAAATCGG CGAAGCCGCG CCCGTGACCG GGCCGGCTTC GTATCTGGGC AAGGACACGG AAAACGGCGC GCGCCTTGCG ATCGAGGAAA TCAACCAGAA GGGGCTCGTG ATCGGCGGAC AGAAGGTGAC GCTGGTGTTC GACGCCCAGG ACGATGCCGG CGATCCGCGT CAGGCGACCC AGGTCGCGCA GAAACTGGTG GACGACAAAG TGGTCGCGGT GGTCGGCCAT ATGCAGTCCG GTTCGACCAT TCCCGCGTCG AAGATTTACA ACGATGCCGG TGTCGTGCAG GTGTCACCGT CCGCGACCAA CCCGGCGTAC ACGTTGCAGG GATTCAAGAC CGCGTATCGC GTGGTCGCCA CCGACGCACA GCAGGGACCC ACGCTCGCCG ATTACGCCGC AAAAACGCTG AAGGTGAAGA CGGTGGCGAT CGTCGACGAT TCGACCGCCT ACGGCCAGGG CCTAGCGGTC GAGTTCGAGA GGCAGGCGAA GGCGAATGGC GTCACGGTGT TGTCGCACGA CGCGAGCACC GACAAGGCCG TCGACTTCCG CGCGATTCTC ACGAAGATCA AGGGCGAAAA GCCGGACGCG ATCATGTACG GTGGCCTCGA CGGCACCGGC GGACCGTTTG CGAAGCAGGC AAAGCAGCTC GGCATCACGA TCAAAGTGCT CGCCGGCGAC GGCTTGTGCG CCGACGACCT CGCGAAACTC GCGGGCGACG CCGCCGATAA CGTGATCTGC TCGATTGCCG GTGCGCCGCT GCTCAAGATG GCCGAAGGTC CGGCGTTTGT CGAACGCTAC AAGAAGCGTT TCGGCTATGC GCCGGTCTTG AATTCTCCGT TTGCATACGA TGCGGTCGGG GTGATCGTTG CAGCGATGAA GCGCGCGCAG TCGACGGACT CCGCGAAGAT TCTCGCGGCG ATGCCGGCGA CCGATTATCA CGGCGTGCTC GGCGAAACGC AGTTCGATTC CAGAGGCGAC CTGCGGCACG GCGTGATCTC GCTGTACAAG TATGTCGGTG GCAAACAGGC GTTATTGGGC GTGGTGGAGA AGTGA
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Protein sequence | MSKSTALGRG MATVGILGTL AAAAVGAARA DEMVKIGEAA PVTGPASYLG KDTENGARLA IEEINQKGLV IGGQKVTLVF DAQDDAGDPR QATQVAQKLV DDKVVAVVGH MQSGSTIPAS KIYNDAGVVQ VSPSATNPAY TLQGFKTAYR VVATDAQQGP TLADYAAKTL KVKTVAIVDD STAYGQGLAV EFERQAKANG VTVLSHDAST DKAVDFRAIL TKIKGEKPDA IMYGGLDGTG GPFAKQAKQL GITIKVLAGD GLCADDLAKL AGDAADNVIC SIAGAPLLKM AEGPAFVERY KKRFGYAPVL NSPFAYDAVG VIVAAMKRAQ STDSAKILAA MPATDYHGVL GETQFDSRGD LRHGVISLYK YVGGKQALLG VVEK
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