Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4230 |
Symbol | |
ID | 6279197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 273265 |
End bp | 274356 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642615328 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_001887981 |
Protein GI | 187918950 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACTG CCCGCTCTTC CTCTCCTGCG TCCCCTGCCA CTGCGCCGAC GGCTCACGAA CTGGTCGAGC AACTGGATGC ACTGCCGCGC GCGTTGCAAG CCCGCCCGAG CCGCTCCGAG GCCGAGTTGA GCGTGGGCAT TCTGTTGTGG CCGCGTTTTC CGATGCTGTC GCTCGCCGGC CTGTGCGATG CACTGCGCCA CGCGGCGGAT CGTGGCGACC AGAGCCGCCA GTTGCGCTGT CTGTGGACCA TCGTCGGCGT TCAGGCCGAA GCGGTCGAAG CGAGTTGCGG CATTCCGGTA CGGGTGCAAT CGGCGTTTCC GGATGTCACG CAATTCGACT ATGTCGTCGT GATCGGCGGA TTGCTGCCGC ATCTGGACCA GGTCGACCGC CGCTACTGGG ACTATCTGCA GCAGGCCGCA CAGGCGGGCA TTCCGCTGGT CGGCATGTGC ACCGGCAGTT TCGTGCTGGC GCGGGCCGGT CTGCTGGAAG ACCGTGTTGC CTGCGTGCAC AGCTTCCATC TGGACGACTA CAGGCGCATG TTTCCGTCAC TGCGCGTGAT CACGCACGCC GACTATCTGA TCGACGGCAA CCGCATCACC TGCGCGGGCG GCATTTCGGT GGTCGAACTC GCCGCGCGTT TGATCAGCTT GCACTGCGGA CCGGACCGCG CGTCGAAGGT GATTCATCAG ATGACCGTCA GCCGTCAGGG CGGCTCATCG TTCGTCGAGC GTCGCGCCGC GCTGGGTTAT CTCTCGGTCG ATGACGCGAC CGTGCGTCAC GCGGTATTGC TCATGGAAGA GAATCTGGAA GCGCCGCTGA ACATCGCGGT CATCGCGAAG ATGATCGGCA CGAGCGTGCG TAACCTCGAA CGCGCGTTCA TGAGCGAGAT GAACGCGTCG CCGAATGAAT TTTATCGGCG CATGCGGCTG CGCTACGCGC GCTGGATGCT CGTCAACACG GCGCGCAAGA TCACCGACAT CGCCTACGAA TGCGGCTTCG CGGATTCGGC GCACTTTATC CGGGCATTTC GCGAAGCGTA TGGCGTGACA CCGGGCAAGC TGCGCGCCTC GCGCAGTGTT GCAACCAGCT GA
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Protein sequence | MPTARSSSPA SPATAPTAHE LVEQLDALPR ALQARPSRSE AELSVGILLW PRFPMLSLAG LCDALRHAAD RGDQSRQLRC LWTIVGVQAE AVEASCGIPV RVQSAFPDVT QFDYVVVIGG LLPHLDQVDR RYWDYLQQAA QAGIPLVGMC TGSFVLARAG LLEDRVACVH SFHLDDYRRM FPSLRVITHA DYLIDGNRIT CAGGISVVEL AARLISLHCG PDRASKVIHQ MTVSRQGGSS FVERRAALGY LSVDDATVRH AVLLMEENLE APLNIAVIAK MIGTSVRNLE RAFMSEMNAS PNEFYRRMRL RYARWMLVNT ARKITDIAYE CGFADSAHFI RAFREAYGVT PGKLRASRSV ATS
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