| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4149 |
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| Symbol | |
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| ID | 6279822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 189796 |
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| End bp | 192963 |
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| Gene Length | 3168 bp |
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| Protein Length | 1055 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642615249 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_001887902 |
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| Protein GI | 187918871 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCG CCCACTTTTT TATCGACCGG CCGATCTTCG CGTCGGTGCT GTCGATCATC
CTCGTGGTGG CCGGCACCGT CGCGATGTTC AACCTGCCGA TCGCGCAGTT CCCCGATATC
GCGCCGCCGA CCATCACCGT GAGCGCGACC TATCCGGGCG CAAGCGCGGA GGTTGTCGCG
CAGAATGTCG CGGCGCCGCT CGAGCAGCAG GTAAACGGCG CGGACAACAT GATGTACATG
AACTCGTCCA GCTCGTCGAC CGGCAATATG ACGCTGACGG CATACTTCAA CATCGGCACG
GATCCGTCGC TGGCGCAGGT GGATGTGCAG AACCGCGTGA ATCTGGCGCT GCCCACGCTG
CCCGATTCGG TAACGGCGCA AGGCGTGTCG GTGCAGAAGC GCTCGTCGGC GTTCATGATG
GTGATCGCGA TCTACTCGCC GGACAACGCG TTCGATCAGT CGTACGTCGC GAACTACGCG
AACGTCTATG TGCTCGACGC GTTAAAGCGC ATTCCGGGCG CGAACCAGGC ATCGATTTTC
GGTTCGGCCG ACTACGCCAT GCGTATCTGG ATCAAGCCCG ACCGCATGGC GAAACTCTCC
ATCACCGTCG CCGATGTGCA GCAGGCGATC AGCAACCAGA ACCAGCAATT TTCCGCGGGC
CGCCTCGGCC AGTCGCCCAC CAACGCGCCG GTCCAGCAGA CCTTTCCGGT GGCGACCAAA
GGCCGCATGA CCAAGCCTGC CGATTTCGAC AACATCATCT TGCGCGCCGG TTCGGGCGAC
GCGTCGACCA TCCGCATCAA GGATATCGGC CACGCGGAAC TGGGCGCGAA AGATTATTCG
CTGCGCGGGC GCTACAACGG CAAAACCGCG ACGCTGATCG CCGTGTATCA GCAGCCGGGC
GCCAACGCGC TGCAAGTCGC CAAGCAGGTG CATGCCACGC TCGAGCAGCT GCAAAAGGCC
TTTCCTCCCG GCCTGAAATA TGAAGTCGCG CTGGATACGA CGGAGTTCGT GCAGGAATCG
ATCGGTGAAG TCATTCACAC GTTGCGCGAC GCGGTGATCC TCGTGATTCT CGTCGTGTTC
ATTTTCCTGC AGAGCTTTCG CGCGACGCTC GTACCGCTTC TCGCCGTGCC CGTGTCGATT
CTCGGCGCGT TCATCGGCAT GCTGGTGTTC GGCTTTTCGG TCAACATGCT GACCTTGTTC
GGCATGGTGC TGGCCATCGG CATCGTTGTG GACGATGCGA TCGTGGTGAT CGAGAATGTC
GAGCGCAATA TGACCGAGTT CGGTCTGCCG CCGAAAGAGG CCGCCAAACA CGCAATGGAC
GAAGTGACCG GGCCGGTCAT CGCGATCGTG CTCGTGCTGC TCGCGGTATT TATTCCGGTG
GCGTTTCTGT CCGGCATCAC GGGGCAGTTG TACAAACAGT TCGCGGTGAC GATCGCCGTC
TCGGTCGTGA TCTCAGGCAT TGTTGCGTTG ACGCTGTCGC CGGCGCTTGC CGCGATTCTG
CTCAAGCCCG GCACGCACAA GAAGAACCGC TTCTTTCTCT GGTTCAACAA GCGTTTCGAC
CGCCTGACGC AAGGCTATGG ACGCGCGGTG CAACTCGCGA TACGCCGCGT CGCGTTGTCG
ATCCTGCTGA TTGTGGCGAT GGTGGCGGCG ACCGCGGGGC TGTTCAAACA CATTCCCTCG
TCGTTCCTGC CCACCGAAGA TCAGGGCTAT CTGCTCGGCG CGGTGGTGCT GCCCGATGCG
GCGAGCCTCG ACCGCACCGG CAACCTCTCG CAACGCGCGG AACAATGGTT CGCTAAGCAG
CCTGCTGTCA AATCGGTCGC CGCGCCGATC GGCTACAGCC TGATCGACTC GCAGTACAAG
TCGAACGCGG GCACGCTGTT CATCACGCTC AAAGGCTTCA AGGATCGTGG CGAGAACGGC
ACCGCGCAAG ACCTGATCCG CGATGCGAAC AAGGCGTTTT CCGGCTACAC GGACGGCGTG
GTAGTGCCGC TGAATCCGCC GTCCATTCCC GGGCTCGGCA CGACCGGCGG CTTCGAGTTC
TGGCTGCAAA GCACCGGCGA CGGCAGCTAT CAGAACCTTG AAGAGAAGGT GCGCGCGTTC
ATTGCGAAGG CGCGTCAGAA CCCGGCGTTG CGTGGCGTCA ACTCGACCAT CAATACGAAC
TCGCGGCAGT TGCTCGTCGA GGTCGACCGC GAGCGCGCGG AATCGCTCGG TGTGCCGATT
CAGGACATTT ACGCCGCGTT GCAGACCATG TTCGGCTCCT CGTATGTGAG TCAATTCCCG
AAGAGCAGCC GGCTCTTTCA GGTGATCGTG CAAGCCGAGC CGCAATACCG CACACAGCCC
GACGACATCC AGCAACTCTA CGTGCGCAAC CGCAGCGGCG ACATGGTGCC GATCAAGGCC
GTCACGACCG TCCGTTTCGT GCCGGGCGCC GACATCGTCA CGCGCTTCAA CAATTTTCCC
GCCGCGAAAA TCACCGGCGA TGCCGCGCCG GGACACAGTT CGGGAGAATC CATCGCCGCG
ATGGAGCAGA TCGCGCACGA GGTGCTCGGC GAAGGTTATA GCTATGCATG GAGCGGCCAG
GCCTACGAAG AAAAGCAGGC CGGCTCGACC GCGATTCTCG TATTCGGTTT TGCCTTGCTG
ATGGTGTTCC TGATCCTCGC GGCCCAATAC GAAAAGTGGT CGTTGCCGAT CGGCGTGCTA
CTGGCGGTGC CGTTCGCGAT ATTCGGCGCG CTCATCGGCA TTCTGTTGCG CGGCATGGAA
GACGACGTGT ACTTCCAGAT CGGCCTGACC GTGCTGATCG CGCTCGCGGC GAAGAACGCG
ATTCTGATCT TCGAGTTCGC CGTCGAGATG CGCGAGAAGG AAGCGCTGTC CCCCTACGAC
GCCGCGCTCA AAGCCGCGAA GCTGCGGCTG CGGCCGATCA TCATGACATC GCTGGCGTTC
ATTCTCGGTT GCGTGCCGCT GGCGATCGCG AGCGGCGCGT CGGCTGCGAG CCGCCGCTCG
CTCGGCACCG GTGTGATCTT CGGCATGCTC GGTGCGACGG TCATCGCGCT GTTCTTCATT
CCGATGTTCT TCTGGGGACT CGAAACATTG TCGTCGCGCG GCAAGAAGGC GCCGGCGCCC
GATGCCGGAC CGCCGGTGTC GCCGGGGCCG CGGGAGGGAG GGACATGA
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| Protein sequence | MKFAHFFIDR PIFASVLSII LVVAGTVAMF NLPIAQFPDI APPTITVSAT YPGASAEVVA
QNVAAPLEQQ VNGADNMMYM NSSSSSTGNM TLTAYFNIGT DPSLAQVDVQ NRVNLALPTL
PDSVTAQGVS VQKRSSAFMM VIAIYSPDNA FDQSYVANYA NVYVLDALKR IPGANQASIF
GSADYAMRIW IKPDRMAKLS ITVADVQQAI SNQNQQFSAG RLGQSPTNAP VQQTFPVATK
GRMTKPADFD NIILRAGSGD ASTIRIKDIG HAELGAKDYS LRGRYNGKTA TLIAVYQQPG
ANALQVAKQV HATLEQLQKA FPPGLKYEVA LDTTEFVQES IGEVIHTLRD AVILVILVVF
IFLQSFRATL VPLLAVPVSI LGAFIGMLVF GFSVNMLTLF GMVLAIGIVV DDAIVVIENV
ERNMTEFGLP PKEAAKHAMD EVTGPVIAIV LVLLAVFIPV AFLSGITGQL YKQFAVTIAV
SVVISGIVAL TLSPALAAIL LKPGTHKKNR FFLWFNKRFD RLTQGYGRAV QLAIRRVALS
ILLIVAMVAA TAGLFKHIPS SFLPTEDQGY LLGAVVLPDA ASLDRTGNLS QRAEQWFAKQ
PAVKSVAAPI GYSLIDSQYK SNAGTLFITL KGFKDRGENG TAQDLIRDAN KAFSGYTDGV
VVPLNPPSIP GLGTTGGFEF WLQSTGDGSY QNLEEKVRAF IAKARQNPAL RGVNSTINTN
SRQLLVEVDR ERAESLGVPI QDIYAALQTM FGSSYVSQFP KSSRLFQVIV QAEPQYRTQP
DDIQQLYVRN RSGDMVPIKA VTTVRFVPGA DIVTRFNNFP AAKITGDAAP GHSSGESIAA
MEQIAHEVLG EGYSYAWSGQ AYEEKQAGST AILVFGFALL MVFLILAAQY EKWSLPIGVL
LAVPFAIFGA LIGILLRGME DDVYFQIGLT VLIALAAKNA ILIFEFAVEM REKEALSPYD
AALKAAKLRL RPIIMTSLAF ILGCVPLAIA SGASAASRRS LGTGVIFGML GATVIALFFI
PMFFWGLETL SSRGKKAPAP DAGPPVSPGP REGGT
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