| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4148 |
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| Symbol | |
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| ID | 6280200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 188110 |
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| End bp | 189792 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642615248 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001887901 |
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| Protein GI | 187918870 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein
[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACGAC GGACGCACGT CTTTGCCGCT TGCCTCGTAC TGACAGCCTT CGCGACGCTG
AGCGGGTGTC ATGAAAAAGA GGCGCCCGCG GCCGCGCGGC CGCCGGTCAA TGTCGGCGTG
GTCGACATTG CATTACGCGA CGTGCCGGTC GTGTTCGATT ACGTCGGCCA GACGGAAAGC
TCGCAGCAGG TCGAAATACG CGCGCGCGTG AACGGCTTTC TCGAGAAGCG CGTCTATCAG
GAAGGCTCGA TGGTCCATCA GGGCGACGTG ATGTTCGTGA TGGATCGTAA ACCCTTCCAG
GCGAGTCTCG ACGCCGCGCG CGCGGAGTTC GCGCAGCAGA AAGCCCGTCT CGACACCGCG
CAGGCGAATC TCAATCGCGT GCGTCCGCTC GTCGCGAAGA ACGCGCTGAG CCAGAAAGAC
CTCGACGATT CGATTGGCCA GCAGCAGGCA GCGGCGGCGG CGCTCGAACA GGCCCGCGCG
AACGTCACGA GCGCGAACCT GAATCTCGGC TACACGACCA TCACGGCGCC GGTCACCGGG
CTGTCGAGCT TCGCGAAGAA GCAGGATGGC TCTTACATCG ATTCGACCAA TAGCCTGCTC
ACGTATGTCG CGAAGCTCGA TCCCATGTGG ATCAACTTCT CGTTGTCCGA GAACGAAATG
CTGCAACTGC GCACGCAGAC CGCGAACGGC ACGCTGAAGC TGCCGCAGAT CGACGATCTC
GAAGCGGTCA TCGTGCTCGC GGACGGCAGC ATCTATCCGC AACGCGGCCA TATCGCGTTC
AGGGACGCGT CGCTGAGTTC CGAGACCGGC ACGTATCTGA TTCGCGCGGC CGTGCCCAAT
CCGGACGGCG CGCTGCGGCC CGGCCAGTTC GTGCGCATCA AGCTGCTGGG CGCCGAGCGG
AGCGCGGCGG TCGCCGTACC GCAAGGCGCG ATCTTGCAGG GACCTCGCGG CGAATATGTG
TGGACCGTCG ACAAGGACAA CAAAGCCCAG CAACGTGCGA TCGAAACGGG CGAGTGGAAC
GGCAACGACT GGGTGGTCAA TTCGGGTCTG CGCGTGGGCG ATCGCGTGGT GATCGATAAC
ACGTTGCGGT TGATGCCCGG TGCGGCGGTG AATGCGCATG TCGTGCCGAT GCCGGCCGCC
AGCGTGAATA TTGCCGCGTT GTCAGGTGGA GGAGCGGGGC CGGCTGGTGG TGGTGGCGGT
GGCACTAGTA GCAATGCGGC GAGCGTCGCG GGTCAAACCG ACGCAAGTGC CGCGTCTGGC
ACGGTGAATG GCGCCGCAGG CGCATCAGCC AACGCAGCCG CTCAGGCAAA TCCAAAGGGC
ACATCGGCGA ACGCGACCAA CCCGTCGGCA CTCCCGGCTG GACAAACCGC GGTGTTCTTC
GCGCTCGGCA GCGCGAGTCT CGATTCGCAG TCGGCCGACG CGCTCGCGGG CGTCGCGCGT
CGCTTGCTCG CCGCGCCCGG TTCGCGCGCC GTGATTTCCG GCTACACCGA TTCCAGCGGC
TCCTATGAAG CCAACGTCAA ACTCGCCGCC GCGCGCGCCG CGACAGTCCG TTCAGCGCTG
ATCGTCGCGG GTGTCGACGT CGCGCGTATC GATATGCGCC GTCCCGCGCG CATCGTGGCA
AGCGACGCGC CCGACAAGTC GCGCCGTGTC GATGTCACCC TCGCGCCGTC GACGGGGGGC
TGA
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| Protein sequence | MIRRTHVFAA CLVLTAFATL SGCHEKEAPA AARPPVNVGV VDIALRDVPV VFDYVGQTES
SQQVEIRARV NGFLEKRVYQ EGSMVHQGDV MFVMDRKPFQ ASLDAARAEF AQQKARLDTA
QANLNRVRPL VAKNALSQKD LDDSIGQQQA AAAALEQARA NVTSANLNLG YTTITAPVTG
LSSFAKKQDG SYIDSTNSLL TYVAKLDPMW INFSLSENEM LQLRTQTANG TLKLPQIDDL
EAVIVLADGS IYPQRGHIAF RDASLSSETG TYLIRAAVPN PDGALRPGQF VRIKLLGAER
SAAVAVPQGA ILQGPRGEYV WTVDKDNKAQ QRAIETGEWN GNDWVVNSGL RVGDRVVIDN
TLRLMPGAAV NAHVVPMPAA SVNIAALSGG GAGPAGGGGG GTSSNAASVA GQTDASAASG
TVNGAAGASA NAAAQANPKG TSANATNPSA LPAGQTAVFF ALGSASLDSQ SADALAGVAR
RLLAAPGSRA VISGYTDSSG SYEANVKLAA ARAATVRSAL IVAGVDVARI DMRRPARIVA
SDAPDKSRRV DVTLAPSTGG
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