| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4122 |
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| Symbol | |
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| ID | 6277645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 164104 |
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| End bp | 164850 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642615223 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001887876 |
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| Protein GI | 187918845 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACC TCACAGGAAA AACCGCGCTC GTCACGGGCG CTTCACGCGG CATCGGCCGC
GCCAGTGCTC TGGCGCTCGC CAGGGCCGGC GCGCAGGTGC TGGTTCACTA CAGCAGCGGC
GAAAAAGAGG CAGATGCCGT GGTTGCGGAA ATTCGCGCGG CCGGCGGCAA TGCGCAGAAA
GTCGCCGCGA ATCTGCGCGC GGCGGACGGC CCGCATACGC TCGCCAAACA GGTGCGCGCC
GTGATCGGCC ATCGGCTGGA TATTCTGGTG GCGAACGCCG GGATTTCGAA GGGCGTCAGC
ATCGAGGACA CGACCGTCGA AGACTTCGAC GATCTGTTCG CCGTGAACGT GCGCGCGCCT
TACTTCCTCG TGCAGCAATT GCTGCCGGTG ATGTGCAAGG GCAGCAGCGT GGTGCTGCTG
TCGTCGCTCG CGGCGCGCGC CGCGGTCGGC ACGCTGTCGG CCTACGCCGC CACCAAGGGC
GCGGTCGATA CGCTCGTCAA GCATTTCGCT GCCGCGCTCG GCGAACGTGG GATTCGTGTG
AATGCGGTCG CGCCGGGTGT GGTCGAAACC GATATGTCGA ACTTCACCAA GACCGACACG
GGGCGCGCGG CGACGCTGGG TATGCAGGCG CTCAAGCGCG TGGCGCAGCC GGACGATATC
GGCGGCGCCG TCGCCTTTCT CGCCTCGGAT GCCGCACGGT GGGTTACCGG CGAAACGTTG
CATGTCGACG GCGGTTCGAA GCTTTAA
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| Protein sequence | MNDLTGKTAL VTGASRGIGR ASALALARAG AQVLVHYSSG EKEADAVVAE IRAAGGNAQK
VAANLRAADG PHTLAKQVRA VIGHRLDILV ANAGISKGVS IEDTTVEDFD DLFAVNVRAP
YFLVQQLLPV MCKGSSVVLL SSLAARAAVG TLSAYAATKG AVDTLVKHFA AALGERGIRV
NAVAPGVVET DMSNFTKTDT GRAATLGMQA LKRVAQPDDI GGAVAFLASD AARWVTGETL
HVDGGSKL
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