| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4102 |
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| Symbol | |
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| ID | 6279024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 141645 |
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| End bp | 142994 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642615203 |
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| Product | glucarate dehydratase |
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| Protein accession | YP_001887856 |
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| Protein GI | 187918825 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACGA AATCTTCCGA ACTGAACGCC ACTCCGGTCG TCACTGAACT GCGTGTCGTG
CCTGTCGCCG GCCGCGACAG CATGTTGCTT AATCTCAGCG GCGCGCATGG TCCGTTCTTC
ACGCGCAATA TCGTCATTCT TCGCGACAGC GCGGGACACA CCGGCGTTGG TGAAGTGCCG
GGCGGCGAGA GCATTCGCAA GACTATCGAC GACGCGCGTC CGCTCGTCGT CGGCCAATCG
ATCGGCAATC TGCAAGCGGT CCTGAACAAG GCGCGCACGC AATTCGCGGA CCGCGACGCG
GGCGGCCGCG GTTTGCAGAC CTTCGATCTG CGCACCACGA TTCACGCGGT GACCGCGCTC
GAAGCCGCGC TGCTCGATCT GCTCGGCCAG CATCTGGGCG TGCCGGTCGC CGCATTGCTC
GGCGAAGGCC AGCAACGCGA CGAAGTGGAA ATGCTCGGCT ATCTGTTCTA TATCGGCGAC
CGCAAGAAGA CCGATCTGGA ATATGCCAGC GGCGCCGATG GCCGCGACGA CTGGGAGCGC
GTGCGCACCG AAGAAGCCAT GACGCCCGAG GCGGTGGTGC GTCTGGCCGA AGCCGCACAG
GCGCGCTACG GCTTCAACGA CTTCAAGCTC AAAGGCGGCG TGCTGCCCGG CGACGCCGAG
ATCGAAGCCG TCACCGCACT CGCCGAGCGT TTCCCGAAGG CACGCGTCAC GCTGGACCCG
AACGGCGCCT GGTCGCTGGC GGAAGCGGTG CGCCTGTGCC GCGACCAGCA CGACGTGCTC
GCCTACGCGG AAGATCCGTG CGGCGCCGAA AACGGTTACT CAGGCCGCGA GGTGATGGCC
GAATTCCGCC GCGCGACCGG CTTGCCGACA GCGACCAACA TGATCGCCAC CGACTGGCGC
CAGATGGGTC ACGCGATCCA GTTGCAATCC GTGGATATTC CGCTTGCCGA TCCGCACTTC
TGGACCATGC AGGGCTCGGT GCGCGTCGCG CAGATGTGCA ACGACTGGGG CCTCACGTGG
GGTTCGCACT CGAACAATCA CTTCGACATT TCGCTTGCGA TGTTCACGCA CGTGGCGGCC
GCTGCGCCCG GCAAGATCAC CGCGATCGAC ACTCACTGGA TCTGGCAGGA CGGCCAGCGT
CTGACGCGCG ATCCGCTGCG GATCGTCGGC GGCAAGGTCA AGGTGCCGCA GGCCGCGGGG
CTCGGTATCG AACTCGACAT GGACGAGATC GAGAAGGCGC ACGCGCTTTA TCAGCAACAC
GGCCTCGGCG CGCGCGACGA CGGCGTGGCC ATGCAATATC TGATTCCGAA CTGGAAGTTC
GACAACAAGC GCCCGTGTCT GGTGCGTTGA
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| Protein sequence | MSTKSSELNA TPVVTELRVV PVAGRDSMLL NLSGAHGPFF TRNIVILRDS AGHTGVGEVP
GGESIRKTID DARPLVVGQS IGNLQAVLNK ARTQFADRDA GGRGLQTFDL RTTIHAVTAL
EAALLDLLGQ HLGVPVAALL GEGQQRDEVE MLGYLFYIGD RKKTDLEYAS GADGRDDWER
VRTEEAMTPE AVVRLAEAAQ ARYGFNDFKL KGGVLPGDAE IEAVTALAER FPKARVTLDP
NGAWSLAEAV RLCRDQHDVL AYAEDPCGAE NGYSGREVMA EFRRATGLPT ATNMIATDWR
QMGHAIQLQS VDIPLADPHF WTMQGSVRVA QMCNDWGLTW GSHSNNHFDI SLAMFTHVAA
AAPGKITAID THWIWQDGQR LTRDPLRIVG GKVKVPQAAG LGIELDMDEI EKAHALYQQH
GLGARDDGVA MQYLIPNWKF DNKRPCLVR
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