| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4089 |
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| Symbol | |
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| ID | 6279855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 127277 |
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| End bp | 128170 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642615190 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001887843 |
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| Protein GI | 187918812 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTAA ATCTTCGGGA CATCCGCGCG TTTATCGCCG TCGCGCAAAC GGGCAGCTTC
ACGCGCGCGG CGACGCGGCT GCATCTGTCG CAACCGGCGT TGACGGTGCA GATTCGCCGC
CTCGAAGAAA CCGTCGGCAT GCGCCTGTTC GACCGCAACA GCCGCAATGT CGCGCTCACG
CCGACCGGCC GTGAATTGCT GCCGCTGCTG CAGAAGTCGC TGCATGACAT GGAGCATGTG
CTGATCGACG CGCGTGCGCT CGGCGTTGGC GCAAGCGGCA CGGTACGGAT CGCCTGTTTG
CCGACGTTTG CGGCCAGCGT GTTGCCCGAA CTCGTGCAGG ACATCAAGAA GGCCGTGCCG
CGCGTGAGCT TTCATGTGCG CGACGTGGTC GCCAGCATGG TCAACACATT GGTGCGCAAT
GAAGAGGTGG ACATCGGACT GACTGGCGGC CAGTTGGACG ATGCCGCTTT CGAGGTGCTG
CATGCGGGCA TCGACCGGCT GGTTGCCGTG TTCCCGAAGC GGCATGCGCT TGCCCGGCGG
CGGCGCATCA CGCTGGCCGA TCTCGCGGTC GCGCCGCTCG TGTTGACCGC GCAAGGCACG
AGCGTGCGGG CGGTGGTCGA TAGCGCTTTC ACGAACGCCC GCTGCACGCC GGAGATCGCG
TGCGAGCCGA CCTACATGAT GACCGCGGTC GCAATGGTGC GCGCCGGACT CGGCGTGACG
ATCCTGCCGG CGTCGGCCCG CGAAGTCAGG GCGGAGCCCG AGCTGATCGT GCGCGCGGTC
GACGACCCCG CGTTTACTCG CCCTATCGCG CTCATCAAGA AACGCGGCAG GACGCTGCCG
CCGGTTACGG AAACCTTTGT GACGATGCTG ATCGAGAAGC TCGGCGCGGA TTGA
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| Protein sequence | MDLNLRDIRA FIAVAQTGSF TRAATRLHLS QPALTVQIRR LEETVGMRLF DRNSRNVALT
PTGRELLPLL QKSLHDMEHV LIDARALGVG ASGTVRIACL PTFAASVLPE LVQDIKKAVP
RVSFHVRDVV ASMVNTLVRN EEVDIGLTGG QLDDAAFEVL HAGIDRLVAV FPKRHALARR
RRITLADLAV APLVLTAQGT SVRAVVDSAF TNARCTPEIA CEPTYMMTAV AMVRAGLGVT
ILPASAREVR AEPELIVRAV DDPAFTRPIA LIKKRGRTLP PVTETFVTML IEKLGAD
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