| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4077 |
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| Symbol | |
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| ID | 6277960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 109779 |
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| End bp | 111503 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642615178 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001887831 |
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| Protein GI | 187918800 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCATG ACCCGATCGC GCCGCCACGG CGTGAAGAAT GGCGCAGCAC AAACGCAGCA
GTTGGGCATC AACCGACTTC GCACGAAGCG CATCGCGCAG GAGCGGTCGC GAGCGACAAG
ACCCCGCAAT CAGCCACTTT CCTCTCGCTC CGCAAAAACA CTTTGGCGTT GGGCGCGGTG
TGCCTCGCCT CGCTGATGTT CGGCCTCGAA ATCTCCAGCG TGCCGGTGAT CCTGCCAACG
CTCGAACGCG TACTGCACGG CGACTTCAAA GGCATGCAGT GGATCATGAA CGCCTACACG
CTCGCGGTGA CCACCGTGCT GATGGCGACC GGCACGCTGG CGGACCGCTT CGGCCGCCGG
CGCATCTTCG TGGTCGGCAT CGCGCTGTTC GGCATCACGT CGCTGATCTG CGGACTCGCG
CAAAGCGTGC CGACGCTGAT CGTCGCGCGC CTGTTGCAAG GCGCGAGCGG CGGCGCCATG
CTGATCTGCC AGGTGGCCGT GCTATCGCAT CAGTTCAATG AAGGCCCCGA ACGCGCTCGC
GCCTTCAGCG CGTGGGGCAT TATCTTCGGT ATTGGACTCG GGTTTGGGCC GATCATCGGC
GGGGCCATCG TGGCGTTGTC GAGTTGGCAA TGGGTCTTCT GGGTGCATGC GCTGCTCGCG
GTCGTGACCT TGATGCTCGT TTTCAGCGGC GTGCAGGAAT CGCGCGACCC GCATGCGCAT
ACGCTCGACG TTGCCGGCAT CGTCACGTTG TCGTTGGCGG TGTTCGGGCT CGTGTATTTC
ATCACGCAGG TTCCGGCGCT TGGATTCAGC AATCCGCGTG CACTCTTCAT TATCGCGGCA
ACGTTGGTCG CATTCGTGGC CTTTCTGTTT GCCGAGAGAC TCAATACGCG GCCCATGTTC
GACTTTTCAG TGTTCAGGAT TCCGCAGTTT TCCGGCGCAC TGATGGGCTC GGCGGGCATG
AACTTCAGCT TCTGGCCGTT CATGATCTAT CTGCCGATCT ATTTCCAGAT CGGCCTCGGC
TACGACAGCG TGAGCGCCGG ACTGGCGTTG CTCGCTTACA CGCTGCCAAC GCTTCTCTTT
CCGCCGCTCG GCGAACGTCT CGCACTGCGT TACGGCTCGG GAATCGCCAT ACCTGCCGGC
CTGTTTACGA TCGGCCTCGG CTTCATGCTG ATGCGTTACG GTAGCGGCGC CGCGCATGCC
GACCTATGGA CCTTGTTGCC CGGTTGCATG ATAGCGGGCG CGGGCCTCGG TCTCACCAAT
ACGCCCGTCA CCAATACGAC CACAGCCGCG GTTCCCGCGG AACGGGCGGG CATGGCGTCG
GGCATCGATA TGAGTGCGCG GATGATTACG CTCGCGATCA ACATCGCGTT GATGGGTGCA
ATCCTGGTCG GCGGAATTCT TGCCAGTCTG AAGACGCGCT TGCCGAAGAC GCTCGACACT
GCGCCGCTCG GCAGACTCGC AGAGAAGATT GCGGCGGGCG ATGTCGAAGC AGTCAGAACG
GGGATGCCCG CGCTGGCGCA AATCGACCCA TCAGGAAGCG CCGTGCATGC CGCGTTGATG
CACGGATTCG GCTGGGTGAT GGTCTACGGC GGAGTCGGCG TGTGGGTGCT TGCCGCGCTC
AGTTTCGTGA TATCCGGCAG CGCGTCGAGA AGGCTAAGCG GCGAGAAATG CGCGCCGGCG
CAAAAGCAGC AGCATCAACC AGCTCAATGC GACGCGTGTA GCTAG
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| Protein sequence | MSHDPIAPPR REEWRSTNAA VGHQPTSHEA HRAGAVASDK TPQSATFLSL RKNTLALGAV
CLASLMFGLE ISSVPVILPT LERVLHGDFK GMQWIMNAYT LAVTTVLMAT GTLADRFGRR
RIFVVGIALF GITSLICGLA QSVPTLIVAR LLQGASGGAM LICQVAVLSH QFNEGPERAR
AFSAWGIIFG IGLGFGPIIG GAIVALSSWQ WVFWVHALLA VVTLMLVFSG VQESRDPHAH
TLDVAGIVTL SLAVFGLVYF ITQVPALGFS NPRALFIIAA TLVAFVAFLF AERLNTRPMF
DFSVFRIPQF SGALMGSAGM NFSFWPFMIY LPIYFQIGLG YDSVSAGLAL LAYTLPTLLF
PPLGERLALR YGSGIAIPAG LFTIGLGFML MRYGSGAAHA DLWTLLPGCM IAGAGLGLTN
TPVTNTTTAA VPAERAGMAS GIDMSARMIT LAINIALMGA ILVGGILASL KTRLPKTLDT
APLGRLAEKI AAGDVEAVRT GMPALAQIDP SGSAVHAALM HGFGWVMVYG GVGVWVLAAL
SFVISGSASR RLSGEKCAPA QKQQHQPAQC DACS
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