| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4075 |
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| Symbol | |
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| ID | 6278537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 106597 |
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| End bp | 108834 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642615176 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001887829 |
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| Protein GI | 187918798 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTGGG CAACAGGCAC GCGCCGGAGT GCAACCGCCG TTACGGCGAG CGTGGCGTTT
TATGCGGCGG CAGCCGCCAG CGCGCAGGCG CAACAGTCGG CGCAACAGCC GGCGCAATCC
GAGGGCAATG CACAGCAAGG AGCTCGTAGC GGCCAACCGG CTGCGACGCA GCCCGCTACG
CTGCCCTCGA TCAGCGTCAA CGGCTTGGCC GGCAACGACG GCACGGTGGG CCTGGTTGCC
CGCCGTAGCA ACACCGGCAC CAAGACCGAT ACCCCGCTGA AGGAAATTCC GCAGACCATC
AACGTCGTCA CGGCGCAGCA GATCGAAGAG ACCGGCGCAA CCAGCATCAA CGAGGCGCTG
CGCTACATTC CGGGCTTCTC GACCTATGGC GCGGACGTGC GCTCCGACTG GTATTCGGTG
TTGCGCGGCT TCACGCCGAC GGTGTTCGTC GACGGCCTGC AGGTGCCCAA TACGCTCAAT
CTCGCGAGCT GGCGTGTCGA TCCGTTCATG ATCGACAGCA TCACCGTGCT GCGCGGCCCG
ACCTCGGTGC TGTACGGGCA GGGCGATCCG GGTGCGATCA TCGACGTGCA GAGCAAGCTT
GCCAACGGCG AGCGTATTCG CGAAGTGGAA ATGCAACTGG GCGACTACGC GCGCAAGCAG
ATCGCATTCG ATGTGGGCGA CAAGGTCGAT CAGGCCGGCA CGCTGTCCTA TCGTTTCCTC
GGCGTGGGAC GCGATGGCAA TTCGCAGACC GGACCCAATC CGGAGCAACG CGTGGCATTG
GCGCCCTCGG TGAAATGGCA GCCGAACGCG AAGACTTCGC TGACGGTCGA GGCGAGCTAT
CTGCAGGATT GGGGCGACGC GTCGAATAAC TTCCTGCCGG CGCAGGGCAC GGTCTTGCCG
AATCCGAACG GCAAGATTTC GCCGGACCTG TACACGGGAG ATCCCGAGTT CTCGCACTAT
CGCAAGAAGC AGTGGTCGGT GGGCTATCAG TTCGAATACA AGTTCGATCC GGTGTGGACT
TTCCGGCAGA ACACGCGCTT GATGCACCTC TCGCTCGATC AGGGGCAGGT GTTCGGCGGA
GGTCTCGATC CGGCCGATCC GACCGAGGCG TCGCTGCTGC GCTATGTCGG TTTGTATCAG
TTGAACTACA GCCGCTTCGA TGTCGACAAT CAGGCGCTGG CTCGCTTCGG CACCGGTCCG
CTCGATCATA CGGTGCTGCT CGGCTTCGAA TACAACCGGC AGGCGACTAC CGATAGCGAA
TCGATGGCGA CCGGTCCGAG TCTGAACATG TATAACCCGG TCTATACGCC GATCACCAAC
GCGATCTTCA GCGGACCGGA CGCGTTCCCG CGTACCGACA CGAAGTCGAC CATGAACGCG
TTCGGCGTGT ATGCGCAGGA CCAGATCAAG TGGCAGCGCT GGGTGCTGAC GCTCGGCGCA
CGCCAGGACT GGAGCAACAC CACGCAGAAC GATATCGCCG GTGGCAGCCG TCTCGAGCAG
AACGATCATG CATTCTCCGG GCGTGTGGGT GTCGTGTATC TCGGCGATTA CGGATTGTCG
CCGTACATCA GCTACTCGAC GTCGTTCAAT CCGCTGGTTG GCGTGAAGAT CGTCGGCGGC
GGCATTGCCG AGCCGACCAA AGGCAAGCAG ATCGAAGCGG GTTTGCGCTG GCAGCCGGCC
GGCAAGAACC TGATGCTGAA CGCCGCGGTT TATCAGATCA ATCAGACCAA CGTCGTGACG
CCTGATTTCG GCATCGATCC GACCGGCGGC ACGAGCGTGC AGACCGGCGA GGTGCGTTCA
CGCGGGATCG AGTTGAGCGG CGTGGGCAAT GTCACGCGCA ACTTTTCGGT GATCGCAGCG
TATGTGTACC AGGACGTGAA GAACATCAAG GCCGGCGACG ATACGTTGGG CAAGTGGCCG
GTGGATATTC CGCGGCCGCG CCAGATGGCG TCGCTGTGGG GCGACTGGAC ATGGCACGCC
GGGCCGCTGG CAGGCCTCGG CTTCGGTGGG GGCATTCGCT ATCAGAGTGG CGCGGCGGGC
GCCGCCGACA ACTCGCTGTA CGTGCCGAGC TACACCGTGT ACGACGCGGC GGTTCACTAC
GAAACGCGCA ACTGGCGCTT CGCGGTGAAC GGTCAGAATA TTTTCAATCG CCGGTTCGTG
AGCGGTTGCC AGTCCGTGAA TACCTGTTTT TACGGGAATC CACGCACAGT GATAGCAACT
GCAAGATACG ACTGGTAA
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| Protein sequence | MEWATGTRRS ATAVTASVAF YAAAAASAQA QQSAQQPAQS EGNAQQGARS GQPAATQPAT
LPSISVNGLA GNDGTVGLVA RRSNTGTKTD TPLKEIPQTI NVVTAQQIEE TGATSINEAL
RYIPGFSTYG ADVRSDWYSV LRGFTPTVFV DGLQVPNTLN LASWRVDPFM IDSITVLRGP
TSVLYGQGDP GAIIDVQSKL ANGERIREVE MQLGDYARKQ IAFDVGDKVD QAGTLSYRFL
GVGRDGNSQT GPNPEQRVAL APSVKWQPNA KTSLTVEASY LQDWGDASNN FLPAQGTVLP
NPNGKISPDL YTGDPEFSHY RKKQWSVGYQ FEYKFDPVWT FRQNTRLMHL SLDQGQVFGG
GLDPADPTEA SLLRYVGLYQ LNYSRFDVDN QALARFGTGP LDHTVLLGFE YNRQATTDSE
SMATGPSLNM YNPVYTPITN AIFSGPDAFP RTDTKSTMNA FGVYAQDQIK WQRWVLTLGA
RQDWSNTTQN DIAGGSRLEQ NDHAFSGRVG VVYLGDYGLS PYISYSTSFN PLVGVKIVGG
GIAEPTKGKQ IEAGLRWQPA GKNLMLNAAV YQINQTNVVT PDFGIDPTGG TSVQTGEVRS
RGIELSGVGN VTRNFSVIAA YVYQDVKNIK AGDDTLGKWP VDIPRPRQMA SLWGDWTWHA
GPLAGLGFGG GIRYQSGAAG AADNSLYVPS YTVYDAAVHY ETRNWRFAVN GQNIFNRRFV
SGCQSVNTCF YGNPRTVIAT ARYDW
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