Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4069 |
Symbol | |
ID | 6280024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 86828 |
End bp | 87856 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642615170 |
Product | periplasmic binding protein |
Protein accession | YP_001887823 |
Protein GI | 187918792 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.423894 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCTG TGATGGCGGC CACGCTGTTT TCCAACGCGT ATGCGTTTGC ACAAGGCAAC GGCACTGCGG CCAGTCCAAC TCAATCAAAC ACCGCACAAG CGCAGCCGCA AACCTGCAAA CCGCTCGCCG ACAACCCAAT CGTCTCGCAA GCCAGTCCGT CGTTGCCCGC GCAACCGAAG CGCATCGTTG TCCTCGAATT CATGTTCGCC GAAGATCTGG CGGCAGTCGG CATCACGCCG GTCGGCATGG CCGATCCCGA GTACTACCCG GTGTGGATCG GTTACGACAA TGCGCGTCTT GCGTCGGTGC CCGACATCGG CACGCGGCAG GAGCCGAGTC TGGAGGCGAT TGCGGCGGCC AAACCCGATC TGATCCTCGG CGTGGGATTG CGCCATGCGC CGATCTTCGC GGCGTTGGAA CGCATCGCGC CGACCGTGCT GTTCAAATAC GGTCCGAACT TTACCGAAGA CGGCGCGCGC GTCACGCAAC TCGATTGGGG CCGCAAGATT CTGCGCACTA TCGGCTGTCT GACGGGACGT GAGGAGGCGG CGCGCGCAGT CGAAGCCAAG GTCGACGCAG GTTTCGCCCG CGACGCGCAG CGTCTCGCCG AAGCGGGCCG TCGCGGCGAA CAGGTAGCGT GGTTGCAGGA GTTGGGCTTG CCGGACCGCT ACTGGGCGTT CACCGGCAAC AGCACGGCAG CGGGTGTCGC GCATGCGCTC GGGCTGAACC TGTGGCCCGC TGAAGCGACG CGCGAAGGCA CCGCGTACGT GAGTTCGGAA GATCTATTGA AGAAGCCGAA GCTGACCGTG CTGTTCGTCA GTGCGACTGA AAAGGATGTC CCGCTCGCCA CCAAACTCGA CTCACCGATC TGGCGTTTCG TGCCGGCTCG CAGCGCGGGG CGCGTTGGGC TTGTCGAGCG GAATATCTGG GGTTTTGGTG GACCGATGTC AGCGCTACGA CTTGCCAATA CGATGACCGA TACGTTGTTG TCGTTGCCGG CGCCGGGCGT CAACAAGCAA GAACGCTAA
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Protein sequence | MNAVMAATLF SNAYAFAQGN GTAASPTQSN TAQAQPQTCK PLADNPIVSQ ASPSLPAQPK RIVVLEFMFA EDLAAVGITP VGMADPEYYP VWIGYDNARL ASVPDIGTRQ EPSLEAIAAA KPDLILGVGL RHAPIFAALE RIAPTVLFKY GPNFTEDGAR VTQLDWGRKI LRTIGCLTGR EEAARAVEAK VDAGFARDAQ RLAEAGRRGE QVAWLQELGL PDRYWAFTGN STAAGVAHAL GLNLWPAEAT REGTAYVSSE DLLKKPKLTV LFVSATEKDV PLATKLDSPI WRFVPARSAG RVGLVERNIW GFGGPMSALR LANTMTDTLL SLPAPGVNKQ ER
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