| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4065 |
|---|
| Symbol | |
|---|
| ID | 6279650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 81933 |
|---|
| End bp | 82967 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642615166 |
|---|
| Product | Taurine catabolism dioxygenase TauD/TfdA |
|---|
| Protein accession | YP_001887819 |
|---|
| Protein GI | 187918788 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.669565 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC TTTCCAAGCC GCTGCCCACG CTCGCCGATT TATCGATCGA GCCGGGCTTG
CCGACTGTCG TCTCGCCGCG CGCGGGCGCG GAGATTTCTT TGGAGGAAGC GGCGCCGCTT
CTCCGTTCGA TCGTCGACGA CACGCTCGAA CGCGCGGGCG GCGTACTGTT CACGGGTTTT
CGCGTGGCCT CGATCGACGC GTTTCAAAGT TTCGCGGGCT CGTTCGGGCA TCCGCTGATC
GGTTATGAAT TCGCTTCGAC GCCGCGCAGC CAGGTGGAAG GCGCGGTCTA TACGTCGACG
GAATATCCGC AGCATCGCTC GATTCCTTTG CATAACGAGC AGTCGTACAC GCGCGAATGG
CCGCTGCGTA TCTGGTTTCA TTGCGCGCTC GCCGCGCGCA CGGGTGGCGC GACGCCGATC
GCCGATAGCC GCGCGATCTA TCGCGCGCTA GACCCGGCGC TAGTCGAGCG CTTTACGAAG
CGTGAACTGC TCTACGTGCG CAACTTCGGA CAAGGACTCG ATCTGCCGTG GGAGCAGGCG
TTCGGATCGG ACGACCCGCG CACCGTCGAG CGGATTTGCC GCGCGCGTGG CATCGAATGC
GAGTGGCGCG ACAGCGAAGA CGGCGAACTG CTGTTGCGCA CGCGCGAGCG CTGCCAGGCA
GTAGCGCGCC ATCCGCGCAC CGGCGAGCGT GTCTGGTTCA ATCAGGCGAA TCTATTCCAT
CTTTCGTCGC TCGACGAAGA CATGCAGGAG GCGCTGATCG ATTCCGTCGG CGTCGAAAAC
GTACCGCGCA ACGTCTATTA CGGCGACGGC GAACCGCTCG AAGCCGAGGC GCTTGCAGAA
ATTCGCGGCG TGCTCGATCA GCAACGGATC GTGTTCCCGT GGCTGACCGG CGACGTGCTG
ATGCTCGACA ACATGCTGAC GGCGCACGCG CGCGATCCGT TCGAAGGCCC GCGCAAAGTC
GTGGTCGCGA TGGCACGAAG CTACAGCGAA GCCGAAGGCG AAAGCGAAGG CAAGAAGCGG
ACGACGGCGG AATGA
|
|---|
| Protein sequence | MTTLSKPLPT LADLSIEPGL PTVVSPRAGA EISLEEAAPL LRSIVDDTLE RAGGVLFTGF
RVASIDAFQS FAGSFGHPLI GYEFASTPRS QVEGAVYTST EYPQHRSIPL HNEQSYTREW
PLRIWFHCAL AARTGGATPI ADSRAIYRAL DPALVERFTK RELLYVRNFG QGLDLPWEQA
FGSDDPRTVE RICRARGIEC EWRDSEDGEL LLRTRERCQA VARHPRTGER VWFNQANLFH
LSSLDEDMQE ALIDSVGVEN VPRNVYYGDG EPLEAEALAE IRGVLDQQRI VFPWLTGDVL
MLDNMLTAHA RDPFEGPRKV VVAMARSYSE AEGESEGKKR TTAE
|
|---|
| |