| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4053 |
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| Symbol | |
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| ID | 6280333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 68137 |
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| End bp | 70359 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642615154 |
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| Product | exopolysaccharide transport protein family |
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| Protein accession | YP_001887807 |
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| Protein GI | 187918776 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATC AATTTTCCCG TGACGAGGAC GAAATTGACA TCCGTGCACT CATAGATGTC
ATTTTCAAGA ATAAGAAGCT GATCATTGCG GTCACTATCG TGTGCACGCT CATCGGGGTC
ATGTACGCAT TCCTGGCAAC GCCGATTTAC CGGGGTGATA TAACGGTTCA GGTAGAAGAC
AACTCAGACC TTGCAGGCGC GGCAGCCGGC AACCTCATGA GCGGATTGAC GTCCCTGTTC
GACATCAAAT CAACAGACGA CGGCGAAATG CAAATCCTCG ACTCGCGACT TGTCACCGCA
AACATGGTCG ACGAATTGCG CCTCTACATC GACGCCAGAC CCAAATACTT TCCGTTGCTT
GGGGCATTCA TTGCGAAGCA TCGGACTTCG CTATCTCAGC CGGGAATTCT CGGCGTAGGC
GGCTATGCGT GGGGCTCGGA AAGCATAGTA GTCGACCAAT TCGACGTGCC TGGTGAGTTT
GAAGAAGATA AGTTCTCCGT CACCACGCTG GGCAACAACC GATATCGGCT CTCGGGCAGC
GATCTCAACG CCGATGTCGT TGGTGTGGTC GGCGTTCCCT TGTTGGCGAA CACCTCTTCC
GGGCCGATCA AGCTGCTGGT GTCGCGGTTG AGCAGCAGAG AGAACGCACA ATTCGAGTTG
CGACGCTTTT CCCGAATTCA AGTCCTCGAA CAGTTGCGAA AGGATCTGGT GATCACAGAG
ATGGGCAAGG ATCAATCCGG CGTCATCGGC GTGACTTATG ACGACCAGGA CCCAGCCCGC
GCAGCGGCAG TATTGAACAA GATCGCAGAA AACTACGTCG CGCAAAATGC CGACCGCAAG
GCCGCGGCGG CGGAAAAGTC CCTCGTTTTC CTGAAAAGCC AACTTCCGGA CGTAGAGCGC
AGCCTGAGGC TGGCTGAAGA CCGTCTCAAT GCCTATCAGA ACCGCCACAA AGTCGTCGAT
CTCAGCGAGC AGGCGAAGGC CGTGCTCGGC CAGGCCGTCG AGGCGCAGTC CAGCCTGTTC
CAACTCGAGC AAAAACGTAA GGAACTTGCA ACGATCTATA GCGCTCAATA TCCCGCCGTG
CTCGCACTGG ATCAACAAAT CGCCGCCGCG CGCGCGCATA TCGACAATTT CAACGAGTCG
ATCCAGCGCC TTCCTGACGA TCAGCAAAAT ATCGTCCGAC TGAATCGCGA CGTGACTGTT
CAAACAAGCC TGTATGTCGG ATTGCTCAAT AGCGTTCAAC AACTGCAACT TGCTACGGCA
AGCAAGATTG GGAACGTCCG CGTAATCGAT CACGCACTGG TCGCCGACAA ACCGACAAAG
CCGAAGAAAG CCCTCGTTAT TGCATTGGCA GCCGTCATCG GGTTGTTTGG CGGAATCGGT
TTCGCCTTGG CGCGTTCAAC GCTGTTTGGC GGCCTGACTG ACCCGATGGA TATCGAACGT
GATCTGTCTC TTGACGTCAT TGCCACTATC CCGCTGAGCG ATACCCAGCG TCAACTGACG
CGAGTCAGGG AACGAGGCGG CCGTCGCGGT CCGTCGATTC TCGCACTGGC GCGCCCACAA
GAACCCGCAG TCGAAGCCAT TCGAAGCCTC TGCACCGCGT TGCAGTTCGC GCTGCTGGAG
AACCCGAAGA ATAACGTCAT TTTAATGACT GGACCTTCCG TCGGTATTGG CAAGTCATTC
ACATCCGCAA ACCTCGCGGC TCTGCTGGGA ATGTCCAAGA AACGTGTGCT CTTGATGGAT
GTCGATCTTC GCCGGGGCCA TCTGGCTGCT GAGTTCGATG TGTCCGGCAA AGTCGGACTC
TCCAACGTGC TCCGGGATGA CATGCCGCTG GAGGCGGCCA TCATCAAAGA TGTGTCTCCG
AACGTGGACT TCCTCGCTAC GGGTCCGTTG ATGGCGCAGC CGGTCGAGTT ACTGTCTTCG
GGCGGCATCG CCAAAATTCT GGCAGACGTG TCCGGCCGAT ACGACATTGT CCTCCTGGAT
GCACCGCCGG TGCTTCCGGT CACAGATGCG ACGGTCTTCG CGCCTTTCGC CGGAATTGTT
CTTCTGGCGG CACGTTCGGG CATGACCAGC AGTGGCGAGC TTCTCGAATC CGCAAAACGA
ATCGAACGTG TCGGAGCAAA GATTACCGGC ATCGTCTTCA ACGGCTTCAA ACCAAGCTTG
CGCTCTGCAC AGTACGGAGA CTATGGCGGT TATGCGTATT TGAGTAACGC GTCGGACACG
TGA
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| Protein sequence | MKNQFSRDED EIDIRALIDV IFKNKKLIIA VTIVCTLIGV MYAFLATPIY RGDITVQVED
NSDLAGAAAG NLMSGLTSLF DIKSTDDGEM QILDSRLVTA NMVDELRLYI DARPKYFPLL
GAFIAKHRTS LSQPGILGVG GYAWGSESIV VDQFDVPGEF EEDKFSVTTL GNNRYRLSGS
DLNADVVGVV GVPLLANTSS GPIKLLVSRL SSRENAQFEL RRFSRIQVLE QLRKDLVITE
MGKDQSGVIG VTYDDQDPAR AAAVLNKIAE NYVAQNADRK AAAAEKSLVF LKSQLPDVER
SLRLAEDRLN AYQNRHKVVD LSEQAKAVLG QAVEAQSSLF QLEQKRKELA TIYSAQYPAV
LALDQQIAAA RAHIDNFNES IQRLPDDQQN IVRLNRDVTV QTSLYVGLLN SVQQLQLATA
SKIGNVRVID HALVADKPTK PKKALVIALA AVIGLFGGIG FALARSTLFG GLTDPMDIER
DLSLDVIATI PLSDTQRQLT RVRERGGRRG PSILALARPQ EPAVEAIRSL CTALQFALLE
NPKNNVILMT GPSVGIGKSF TSANLAALLG MSKKRVLLMD VDLRRGHLAA EFDVSGKVGL
SNVLRDDMPL EAAIIKDVSP NVDFLATGPL MAQPVELLSS GGIAKILADV SGRYDIVLLD
APPVLPVTDA TVFAPFAGIV LLAARSGMTS SGELLESAKR IERVGAKITG IVFNGFKPSL
RSAQYGDYGG YAYLSNASDT
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