| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4015 |
|---|
| Symbol | |
|---|
| ID | 6279828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 27774 |
|---|
| End bp | 29207 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642615118 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_001887771 |
|---|
| Protein GI | 187918740 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGCC TGCCGATCGA CGCGTCCGGC GCGTCGCCCC ACTCAAGCGC CGGCGCGCCG
GCGCTCACGC CCGGCGTCAA CGCGCGCATC GACCGCCTGC CCGCGACGCG CGCGGTGTGG
ATGCTGGTGC TCCTGCTGTC GATCGGCGGC TGGTTCGAGT TCTACGATCT GTTCTTCACG
GCGTACGTCG GCCCGGGCCT CGTCAAAAGC GGGGTTTACT CGACGACCAC CGCGTCGTTC
TTCGGCGTGT CCGGACTCGG CGCATTCGTG GCGGCGTCGT TTGCCGGGCT CTTCATCGGC
ACGTTCTTTC TGGCGGGCAT GGCCGACCGC TACGGCCGCA AGACCGTGTT CACCGTGTCG
CTGCTGTGGT ACTCCGCCGC GACGCTCATC ATGGCGCTGC AAAGCACGGC GCCCGCCATC
AATCTGTGGC GCCTGATCGC CGGCATCGGC GTGGGCGTCG AACTGGTGAC GATCGATACC
TACGTCAGCG AACTCGTGCC TAAACATCTG CGCGGCCGTG CTTTTGCGTT CGTGCATCTG
GTGCAGTACA CCGCTGTGCC GTCGGTTGCG TTTCTCGCGT GGTGGCTGGT GCCGCGCACG
CCGTTCGGAC TCGACGGCTG GCGCTGGGTC GTGATCATCG GCGCGTTGGG CGCGGTGGTG
GTGTGGGCGA TTCGCCGGCG CTTGCCGGAA AGCCCGCGCT GGCTCGCTCA ACAAGGCCGC
GCCGCCGAAG CCGAGCAGGT GCTGCAGGCG TTGGAAGCGA AAGTCGCCGC ACAATACGGC
AAGCCTCTGC CGCCCGCGGT ACCGACTGTC GAACCGGCGA CCACCAAGGC TGCCTTCCGT
GAAATCTGGC AGCCGCCGTA TCGCAAACGC GCGATCACGA TGCTCGTCTT CAATCTGTTC
CAGGCGATCG GCTTTTACGG CTTCGCCTCA TGGGTGCCGA CGCTCCTCGT CTCCAAAGGC
GTGACGATCA CGCACAGTCT GCTGTACTCG TTCGTGATCG CTGCTTCGAA TCCGTTCGGG
CCGCTGATCG GCATGGCGAT CGCGGACCGC ATCGAACGGA AGACGTTGAT CGTGCTGTCG
GCGCTCGGCA TCGCCGTGTT CGGCAGCCTG TTCGCGATGC AAACCTCGCC CGCCATGCTG
ATGACGCTTG GCGTGCTGAT CACGCTGAGC GGCACGCTGC TTTCGGTCGG CTATCACGCG
TATCAAACCG AACTCTTCCC CACGCGTTTG CGGGCGCGCG CCGTCGGCTT CGTCTACTCG
ATGTCGCGTC TCTCCGCGAT GTTCTCCGGC TTCATGATCG CGTTCGCGCT GCGTCACTTC
GGCGTGAGCG GCGTGTTCGC GTTGATCAGT GCGTCGATGG TGATGGTGAT GGGCGCGATC
GGCATCTTCG GGCCACGGAC CAACCATCGC AATCTCGACG AGATTTCGCA CTGA
|
|---|
| Protein sequence | MASLPIDASG ASPHSSAGAP ALTPGVNARI DRLPATRAVW MLVLLLSIGG WFEFYDLFFT
AYVGPGLVKS GVYSTTTASF FGVSGLGAFV AASFAGLFIG TFFLAGMADR YGRKTVFTVS
LLWYSAATLI MALQSTAPAI NLWRLIAGIG VGVELVTIDT YVSELVPKHL RGRAFAFVHL
VQYTAVPSVA FLAWWLVPRT PFGLDGWRWV VIIGALGAVV VWAIRRRLPE SPRWLAQQGR
AAEAEQVLQA LEAKVAAQYG KPLPPAVPTV EPATTKAAFR EIWQPPYRKR AITMLVFNLF
QAIGFYGFAS WVPTLLVSKG VTITHSLLYS FVIAASNPFG PLIGMAIADR IERKTLIVLS
ALGIAVFGSL FAMQTSPAML MTLGVLITLS GTLLSVGYHA YQTELFPTRL RARAVGFVYS
MSRLSAMFSG FMIAFALRHF GVSGVFALIS ASMVMVMGAI GIFGPRTNHR NLDEISH
|
|---|
| |