Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_A0291 |
Symbol | |
ID | 6273330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010660 |
Strand | - |
Start bp | 197791 |
End bp | 198306 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641728904 |
Product | transposase (IS4 family) |
Protein accession | YP_001883294 |
Protein GI | 187734329 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 4.34578e-32 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCCGCC GGTGCTCAAA AAAACATCCC GATATCGACG GAGATAATGG GCCGGGTCGC TCTCGCGGCG GTTTTGGCAC CAAAATCCAT CTGGCAACAG ACGGAAGTGG CCTCCCGTTA AATATCGTGC TAAGCCCCGG ACAAGCTCAT GAAAGCCAGT TCGCGCAACG ACTTCTGGAC GGGATTGGCG TTCAGCGTCA GAACGGCAGC ATGAAACGCC GTGGACATGC GGTACTGGCT GATAAAGCGT ATTCAGGGCG CGCATTGCGC AATGAGCTGA AAAATAACGG TATAAAGGCA GTAATCCCCC GAAAGTCAAA TGAGAAAATG GCATCGGATG GACGTGCACA GCTTGATCGT GATGCGTACC GCAATCGTAA TGTCGTTGAA CGGTGCTTTG GGCGGCTGAA AGAATATCGC CGCATCGCCA CGCGTTACGA CAAAACGGCG AGAAATTACC TGGCGATGGT GAAACTGGGC TGCATCCGAC TCTTTTATCA ACGCTTACGT AATTAA
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Protein sequence | MCRRCSKKHP DIDGDNGPGR SRGGFGTKIH LATDGSGLPL NIVLSPGQAH ESQFAQRLLD GIGVQRQNGS MKRRGHAVLA DKAYSGRALR NELKNNGIKA VIPRKSNEKM ASDGRAQLDR DAYRNRNVVE RCFGRLKEYR RIATRYDKTA RNYLAMVKLG CIRLFYQRLR N
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