Gene SbBS512_A0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_A0039 
Symbol 
ID6273438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010660 
Strand+ 
Start bp23152 
End bp23829 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content36% 
IMG OID641728708 
ProductOspD1 
Protein accessionYP_001883099 
Protein GI187734502 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones148 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATAA ATAACTATGG ATTACATCCA GCAAACAACA AAAATATGCA CCTAATAATA 
GGCAGCAATA CTGCTAATGA AAATAAAGGA ATGAAACGTA ATATCATTAA CGTGACAAAT 
ACCGCTATAT CCCACGCCAT CAATGAAGAA AAATCAGGGG GGGGATATAG TGGTGTTTCT 
TTCAGAAAAT TGGCCAAAAT ACAGAGCATA TCCATTCCGA CAAAGAATAA TAAGGAGTAT 
AACCGCCATA ATTTGTTTTC ATTGATTTGG CATGGAAATG CCGATGCAGC GCGTAAATAC 
GGTGAATCGC TGTTGGCAGC CGAAATACCC AAAGAGGAAA AACTAGAAGT TCTTGCAGCA 
CGAAATAATG CTGGGGAATC TGCTTTGTTC ATAGCTCTTC AAGAAGGTCA TTCCGCTGCG 
ATTCAAGCTT ATGGAGATTT TATTAAAACT TTTGATTTAT CACCAAAAGA AACGATTAAA 
CTATTGGATG TAAGAGATAA TGAGGGGTTA CCAGGATTAT TTCTGGCCGC AGGGAAAGGG 
AATATCGAGG CTATGATGGC ATATATAAAT ATATGCCATC ATAGTGGGAT AAAACTTACA 
GAAATAGCAG ACAGACTTAA CAATAATGAA CAAGACATGT TTAATATTAT TTCTGACAAA 
ATACAAGAGT TGTTTTAA
 
Protein sequence
MSINNYGLHP ANNKNMHLII GSNTANENKG MKRNIINVTN TAISHAINEE KSGGGYSGVS 
FRKLAKIQSI SIPTKNNKEY NRHNLFSLIW HGNADAARKY GESLLAAEIP KEEKLEVLAA 
RNNAGESALF IALQEGHSAA IQAYGDFIKT FDLSPKETIK LLDVRDNEGL PGLFLAAGKG 
NIEAMMAYIN ICHHSGIKLT EIADRLNNNE QDMFNIISDK IQELF