Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_A0036 |
Symbol | |
ID | 6273406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010660 |
Strand | + |
Start bp | 20358 |
End bp | 21590 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641728706 |
Product | transposase family |
Protein accession | YP_001883097 |
Protein GI | 187734287 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 132 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACCT CACTTGCTCA TGAGAATGCC CGCCTGCGGG CACTGTTGCA GACGCAACAG GACACCATCC GCCAGATGGC GAAATACAAC CGCCTGCTCT CACAGCGGGT GGCGGCTTAT GCTTCCGAAA TCAACCGGCT GAAGGCGCTG GTTGCGAAAC TGCAGCGCAT GCAGTTCGGT AAAAGCTCAG AAAAACTTCG CGCAAAAACC GAACGGCAGA TACTGGAAGC ACAGGAGCGA ATCAGCGCAC TTCAGGAAGA AATGGCGGAA ACGCTGGGTG AGCAATATGA CCCGGTACTG CCATCTCCCC TGCGCCAGTC TTCAGCCCGT AAACCGTTAC CTGCCTCACT TCCCCGTGAA ACCCGGGTCA TCCGTCCGGA AGAGGAATGC TGCCCGGCCT GTGGTGGCGA ACTCAGTTCT CTGGGATGTG ATGTGTCAGA GCAGCTGGAG CTTATCAGCA GCGCCTTTAA GGTTATCGAA ACACAACGTC CGAAACTGGC CTGTTGCCGG TGTGACCATA TCGTGCAAGC ACCGGTGCCT TCAAAACCCA TTGCACGCAG TTATGCCGGA GCGGGGCTTC TGGCCCATGT TGTCGCTGGA AAATATGCAG ACTATCTGCC GTTATACCGC CAGTCAGAAA TATACCGTCG TCAGGGCGTG GAGCTGAGCC GTGCCACACT GGGGCGCTGG ACAGGTGCTG TTGCTGAACT GCTGGAACCG CTGTATGACA TCCTGCGCCA GTATGTGCTG ATGCCCGGTA AAGTCCATGC CGATGATATC CCCGTTCCGG TCCAGGAGCC GGGCAGCGGT AAAACAAGGA CTGCCCGGCT GTGGGTCTAC GTTCGTGATG ACCGTAACGC CGGTTCGGAA ATGCCTCCGG CGGTCTGGTT CGCGTACTCA CCGGACCGGA AAGGTATCCA TCCACAGAAT CATCTGGCCG GTTACAGCGG AGTGCTTCAG GCCGATGCTT ACGGTGGTTA CCGGGCGTTG TACGAATCCG GCAGAATAAC GGAAGCCCTG CTGCGTATCG GTGAACTGTA TGCCATCGAG GCAGAAGTCC GGGGATGTTC AGCAGAACAG CGTCTGGCGG CAAGAAAAGC CAGAGCCGCG CCACTGATGC AGTCATTGTA TGACTGGATA CAGCAACAGA TGAAAATTCA TTCGCTGAAA ATGGAATGTC TCCACGGAGA ACACTATTAT CCATCGGGAA ATAGTGCGGG CAACAGTGTT TAG
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Protein sequence | MDTSLAHENA RLRALLQTQQ DTIRQMAKYN RLLSQRVAAY ASEINRLKAL VAKLQRMQFG KSSEKLRAKT ERQILEAQER ISALQEEMAE TLGEQYDPVL PSPLRQSSAR KPLPASLPRE TRVIRPEEEC CPACGGELSS LGCDVSEQLE LISSAFKVIE TQRPKLACCR CDHIVQAPVP SKPIARSYAG AGLLAHVVAG KYADYLPLYR QSEIYRRQGV ELSRATLGRW TGAVAELLEP LYDILRQYVL MPGKVHADDI PVPVQEPGSG KTRTARLWVY VRDDRNAGSE MPPAVWFAYS PDRKGIHPQN HLAGYSGVLQ ADAYGGYRAL YESGRITEAL LRIGELYAIE AEVRGCSAEQ RLAARKARAA PLMQSLYDWI QQQMKIHSLK MECLHGEHYY PSGNSAGNSV
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