Gene SbBS512_A0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_A0036 
Symbol 
ID6273406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010660 
Strand
Start bp20358 
End bp21590 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content56% 
IMG OID641728706 
Producttransposase family 
Protein accessionYP_001883097 
Protein GI187734287 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones132 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACCT CACTTGCTCA TGAGAATGCC CGCCTGCGGG CACTGTTGCA GACGCAACAG 
GACACCATCC GCCAGATGGC GAAATACAAC CGCCTGCTCT CACAGCGGGT GGCGGCTTAT
GCTTCCGAAA TCAACCGGCT GAAGGCGCTG GTTGCGAAAC TGCAGCGCAT GCAGTTCGGT
AAAAGCTCAG AAAAACTTCG CGCAAAAACC GAACGGCAGA TACTGGAAGC ACAGGAGCGA
ATCAGCGCAC TTCAGGAAGA AATGGCGGAA ACGCTGGGTG AGCAATATGA CCCGGTACTG
CCATCTCCCC TGCGCCAGTC TTCAGCCCGT AAACCGTTAC CTGCCTCACT TCCCCGTGAA
ACCCGGGTCA TCCGTCCGGA AGAGGAATGC TGCCCGGCCT GTGGTGGCGA ACTCAGTTCT
CTGGGATGTG ATGTGTCAGA GCAGCTGGAG CTTATCAGCA GCGCCTTTAA GGTTATCGAA
ACACAACGTC CGAAACTGGC CTGTTGCCGG TGTGACCATA TCGTGCAAGC ACCGGTGCCT
TCAAAACCCA TTGCACGCAG TTATGCCGGA GCGGGGCTTC TGGCCCATGT TGTCGCTGGA
AAATATGCAG ACTATCTGCC GTTATACCGC CAGTCAGAAA TATACCGTCG TCAGGGCGTG
GAGCTGAGCC GTGCCACACT GGGGCGCTGG ACAGGTGCTG TTGCTGAACT GCTGGAACCG
CTGTATGACA TCCTGCGCCA GTATGTGCTG ATGCCCGGTA AAGTCCATGC CGATGATATC
CCCGTTCCGG TCCAGGAGCC GGGCAGCGGT AAAACAAGGA CTGCCCGGCT GTGGGTCTAC
GTTCGTGATG ACCGTAACGC CGGTTCGGAA ATGCCTCCGG CGGTCTGGTT CGCGTACTCA
CCGGACCGGA AAGGTATCCA TCCACAGAAT CATCTGGCCG GTTACAGCGG AGTGCTTCAG
GCCGATGCTT ACGGTGGTTA CCGGGCGTTG TACGAATCCG GCAGAATAAC GGAAGCCCTG
CTGCGTATCG GTGAACTGTA TGCCATCGAG GCAGAAGTCC GGGGATGTTC AGCAGAACAG
CGTCTGGCGG CAAGAAAAGC CAGAGCCGCG CCACTGATGC AGTCATTGTA TGACTGGATA
CAGCAACAGA TGAAAATTCA TTCGCTGAAA ATGGAATGTC TCCACGGAGA ACACTATTAT
CCATCGGGAA ATAGTGCGGG CAACAGTGTT TAG
 
Protein sequence
MDTSLAHENA RLRALLQTQQ DTIRQMAKYN RLLSQRVAAY ASEINRLKAL VAKLQRMQFG 
KSSEKLRAKT ERQILEAQER ISALQEEMAE TLGEQYDPVL PSPLRQSSAR KPLPASLPRE
TRVIRPEEEC CPACGGELSS LGCDVSEQLE LISSAFKVIE TQRPKLACCR CDHIVQAPVP
SKPIARSYAG AGLLAHVVAG KYADYLPLYR QSEIYRRQGV ELSRATLGRW TGAVAELLEP
LYDILRQYVL MPGKVHADDI PVPVQEPGSG KTRTARLWVY VRDDRNAGSE MPPAVWFAYS
PDRKGIHPQN HLAGYSGVLQ ADAYGGYRAL YESGRITEAL LRIGELYAIE AEVRGCSAEQ
RLAARKARAA PLMQSLYDWI QQQMKIHSLK MECLHGEHYY PSGNSAGNSV