Gene SbBS512_A0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_A0011 
Symbol 
ID6273484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010660 
Strand
Start bp5157 
End bp6062 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content55% 
IMG OID641728688 
ProductIS2 transposase orfB 
Protein accessionYP_001883079 
Protein GI187734319 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones134 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAGCG CACGCGCCCT TATTGCCCGG GGATGGGGAG TAAGCTTAGT CAGCCGTTGT 
CTCCGGGTGT CGCGTGCGCA GTTGCACGTC ATTCTCAGAC GAACCGATGA CTGGATGGAT
GGCCGCCGCA GTCGTCACAC TGATGATACG GATGTGCTTC TCCGTATACA CCATGTTATC
GGAGAGCTGC CCACGTATGG TTATCGTCGG GTATGGGCGC TGCTTCGCAG ACAGGCAGAA
CTTGATGGTA TGCCTGCGAT CAATGCCAAA CGTGTTTACC GGATCATGCG CCAGAATGCG
CTGTTGCTTG AGCGAAAACC TGCTGTACCG CCATCGAAAC GGGCACATAC AGGCAGAGTG
GCCGTGAAAG AAAGCAATCA GCGATGGTGC TCTGACGGGT TCGAGTTCTG CTGTGATAAC
GGAGAGAGAC TGCGTGTCAC GTTCGCGCTG GACTGCTGTT ATCGTGAGGC ACTGCACTGG
GCGGTGACTA CCGGCGGCTT CAACAGTGAA ACAGTACAGG ACGTCATGCT GGGTGCGGTG
GAACGCCGCT TCGGCAACGA TCTTCCGTCG TCTCCAGTGG AGTGGCTGAC GGATAATGGT
TCATGCTACC GGGCTAATGA AACACGCCAG TTCGCCCGGA TGTTGGGACT TGAACCGAAG
AACACGGCGG TGCGGAGTCC GGAGAGTAAC GGAATAGCAG AGAGCTTCGT GAAAACGATA
AAGCGTGACT ACATCAGTAT CATGCCCAAA CCAGACGGGT TAACGGCAGC AAAGAACCTT
GCAGAGGCGT TCGAGCATTA TAACGAATGG CATCCGCATA GTGCGCTGGG TTATCGCTCG
CCACGGGAAT ATCTGCGGCA GCGGGCTTGT AATGGGTTAA GTGATAACAG ATGTCTGGAA
ATATAG
 
Protein sequence
MDSARALIAR GWGVSLVSRC LRVSRAQLHV ILRRTDDWMD GRRSRHTDDT DVLLRIHHVI 
GELPTYGYRR VWALLRRQAE LDGMPAINAK RVYRIMRQNA LLLERKPAVP PSKRAHTGRV
AVKESNQRWC SDGFEFCCDN GERLRVTFAL DCCYREALHW AVTTGGFNSE TVQDVMLGAV
ERRFGNDLPS SPVEWLTDNG SCYRANETRQ FARMLGLEPK NTAVRSPESN GIAESFVKTI
KRDYISIMPK PDGLTAAKNL AEAFEHYNEW HPHSALGYRS PREYLRQRAC NGLSDNRCLE
I