Gene SbBS512_E4949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4949 
SymbolarcA 
ID6272148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp4613935 
End bp4614651 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content51% 
IMG OID641728674 
Producttwo-component response regulator 
Protein accessionYP_001883065 
Protein GI187733961 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACCC CGCACATTCT TATCGTTGAA GACGAGTTGG TAACACGCAA CGCGTTGAAA 
AGTATTTTCG AAGCGGAAGG CTATGATGTT TTCGAAGCGA CAGATGGCGC GGAAATGCAT
CAGATCCTCT CTGAATATGA CATCAACCTG GTGATCATGG ATATCAATCT GCCGGGTAAG
AACGGTCTTC TGTTAGCGCG TGAACTGCGC GAGCAGGCGA ATGTTGCGTT GATGTTCCTG
ACTGGCCGTG ACAACGAAGT CGATAAAATT CTCGGCCTCG AAATCGGTGC AGATGACTAC
ATCACCAAAC CGTTCAACCC GCGTGAACTG ACGATTCGTG CACGCAACCT GCTGTCCCGT
ACCATGAATC TGGGTACTGT CAGCGAAGAA CGTCGTAGCG TTGAAAGCTA CAAGTTCAAT
GGTTGGGAAC TGGACATCAA CAGCCGTTCG TTGATCAGCC CTGATGGCGA GCAGTACAAG
CTGCCGCGCA GCGAGTTCCG CGCCATGCTT CACTTCTGTG AAAACCCAGG CAAAATTCAG
TCTCGTGCTG AACTGCTGAA GAAAATGACC GGCCGTGAGC TGAAACCACA CGACCGTACT
GTAGACGTGA CGATCCGCCG TATTCGTAAA CATTTCGAAT CTACGCCGGA TACGCCGGAA
ATCATCGCCA CCATCCACGG TGAAGGTTAT CGCTTCTGTG GTGATCTGGA AGATTAA
 
Protein sequence
MQTPHILIVE DELVTRNALK SIFEAEGYDV FEATDGAEMH QILSEYDINL VIMDINLPGK 
NGLLLARELR EQANVALMFL TGRDNEVDKI LGLEIGADDY ITKPFNPREL TIRARNLLSR
TMNLGTVSEE RRSVESYKFN GWELDINSRS LISPDGEQYK LPRSEFRAML HFCENPGKIQ
SRAELLKKMT GRELKPHDRT VDVTIRRIRK HFESTPDTPE IIATIHGEGY RFCGDLED