Gene SbBS512_E4878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4878 
Symbol 
ID6272357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp4549531 
End bp4550487 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content55% 
IMG OID641728613 
Productputative GTP-binding protein YjiA 
Protein accessionYP_001883007 
Protein GI187733879 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCGA TTGCAGTTAC CCTACTCACC GGTTTTTTAG GCGCGGGCAA AACCACCCTG 
CTGCGCCATA TTCTTAACGA ACAACACGGC TACAAGATTG CCGTGATTGA AAACGAATTC
GGCGAAGTCT CCGTTGATGA TCAACTGATT GGCGACCGCG CCACGCAGAT CAAAACGCTG
ACCAACGGCT GCATCTGCTG TTCGCGCTCC AACGAGCTGG AAGACGCACT ACTCGACCTG
CTGGATAATC TCGACAAGGG CAATATTCAG TTCGACCGTC TGGTCATTGA ATGCACCGGC
ATGGCCGATC CCGGCCCGAT TATTCAGACC TTCTTCTCCC ATGAGATTTT ATGCCAGCGC
TACCTGCTGG ACGGGGTGAT TGCGCTGGTG GATGCGGTAC ATGCCGATGA GCAGATGAAC
CAGTTCACCA TCGCCCAGTC CCAGGTTGGC TACGCCGACC GTATTCTGCT GACGAAAACC
GACATCGCAG GCGAAGCAGA GAAACTGCGT GAACGCCTGG CGCGCATCAA CGCCCGCGCA
CCGGTCTACA CCGTTACCCA CGGCGATATC GACCTGGGCC TTCTGTTCAA CACCAACGGT
TTTATGCTGG AAGAAAACGT CGTCAGCACC AAACCGCGTT TCCACTTTAT CGCGGACAAA
CAAAACGATA TTTCGTCGAT TGTGGTGGAA CTGGATTACC CAGTAGATAT CAGCGAAGTT
TCCCGGGTGA TGGAAAACCT GCTGCTGGAA TCGGCGGATA AACTGCTGCG TTACAAAGGG
ATGCTGTGGA TTGACGGCGA ACCTAACCGC CTGCTGTTCC AGGGCGTCCA GCGCCTCTAC
AGCGCCGACT GGGACCGCCC GTGGGGCGAT GAAAAACCGC ATAGCACGAT GGTGTTTATC
GGGATTCAGT TGCCGGAGGA TGAGATTCGG GCGGCGTTTG CGGGACTCAA AAAGTAA
 
Protein sequence
MNPIAVTLLT GFLGAGKTTL LRHILNEQHG YKIAVIENEF GEVSVDDQLI GDRATQIKTL 
TNGCICCSRS NELEDALLDL LDNLDKGNIQ FDRLVIECTG MADPGPIIQT FFSHEILCQR
YLLDGVIALV DAVHADEQMN QFTIAQSQVG YADRILLTKT DIAGEAEKLR ERLARINARA
PVYTVTHGDI DLGLLFNTNG FMLEENVVST KPRFHFIADK QNDISSIVVE LDYPVDISEV
SRVMENLLLE SADKLLRYKG MLWIDGEPNR LLFQGVQRLY SADWDRPWGD EKPHSTMVFI
GIQLPEDEIR AAFAGLKK