| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4829 |
|---|
| Symbol | argF |
|---|
| ID | 6270382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 4500749 |
|---|
| End bp | 4501753 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641728568 |
|---|
| Product | ornithine carbamoyltransferase subunit I |
|---|
| Protein accession | YP_001882962 |
|---|
| Protein GI | 187731007 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0078] Ornithine carbamoyltransferase |
|---|
| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGGT TTTATCATAA GCATTTCCTG AAATTACTCG ATTTCACGCC AGCTGAACTC
AACAGCCTGC TGCAGTTAGC CGCGAAGCTG AAAGCCGATA AGAAAAGCGG CAAAGAAGAA
GCCAAACTCA CTGGTAAAAA CATCGCGCTC ATCTTCGAAA AAGACTCGAC CCGTACCCGA
TGCTCTTTCG AAGTTGCCGC ATATGACCAG GGTGCTCGCG TTACTTATCT CGGCCCAAGC
GGCAGTCAGA TTGGTCATAA AGAGTCGATT AAAGACACTG CCCGCGTGCT GGGTCGCATG
TATGACGGTA TTCAGTATCG CGGCTATGGT CAGGAGATTG CCGAAACACT GGCGGAATAC
GCTGGCGTGC CGGTATGGAA CGGCCTGACC AATGAGTTTC ACCCCACGCA GTTGCTGGCG
GATCTCCTCA CCATGCAGGA GCATTTACCC GGTAAAGCAT TCAACGAAAT GACGCTGGTC
TATGCAGGTG ACGCACGTAA CAACATGGGC AATTCGATGC TCGAAGCTGC GGCGCTTACC
GGTCTGGATT TGCGTCTGGT CGCGCCACAA GCATGCTGGC CGGAAGCTGC GCTGGTTACG
GAATGCCGCG CCCTGGCACA GCAAAATGGC GGGAATATTA CGCTGACGGA AGATGTAGCC
AAAGGTGTTG AAGGTGCTGA CTTTATCTAT ACCGATGTAT GGGTGTCGAT GGGGGAAGCA
AAAGAGAAAT GGGCAGAACG GATTGCATTA CTGCGTGATT ATCAGGTGAA CAGCAAGATG
ATGCAGTTGA CCGGTAACCC GGAGGTCAAA TACCTCCACT GCCTGCCCGC GTTTCATGAC
GACCAGACGA CGCTTGGTAA GAAAATGGCG GAAGAGTTTG GCCTACATGG CGGAATGGAA
GTGACTGATG AGGTCTTCGA ATCTGCCGCC AGCATTGTTT TTGATCAGGC GGAAAACCGC
ATGCATACCA TCAAAGCGGT GATGGTCGCG ACGCTCAGTA AATAA
|
|---|
| Protein sequence | MSGFYHKHFL KLLDFTPAEL NSLLQLAAKL KADKKSGKEE AKLTGKNIAL IFEKDSTRTR
CSFEVAAYDQ GARVTYLGPS GSQIGHKESI KDTARVLGRM YDGIQYRGYG QEIAETLAEY
AGVPVWNGLT NEFHPTQLLA DLLTMQEHLP GKAFNEMTLV YAGDARNNMG NSMLEAAALT
GLDLRLVAPQ ACWPEAALVT ECRALAQQNG GNITLTEDVA KGVEGADFIY TDVWVSMGEA
KEKWAERIAL LRDYQVNSKM MQLTGNPEVK YLHCLPAFHD DQTTLGKKMA EEFGLHGGME
VTDEVFESAA SIVFDQAENR MHTIKAVMVA TLSK
|
|---|
| |