Gene SbBS512_E4747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4747 
Symbol 
ID6272897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp4430330 
End bp4430977 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content40% 
IMG OID641728504 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001882899 
Protein GI187730486 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.000000342659 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCTTG ATACCAGCAA CGTACAGAGC CTGAAGGAAA AGCTGCTGTT ATGCGCGGTT 
AATGAATTTG CCGAATATGG TTATGAAGGG GCCAGGGTCG ATAATATTGT TAAGGCTGCG 
GGGTGTAGTA AACAGACGGT TTATCATCAC TTTGGTAATA AAGAAAATTT ATTTATTGAA 
GTACTGGAAT ATACCTGGAA CGATATTCGA CAAAAAGAAA AGGCCCTTGA TTTCTCAGAT 
CTTCTGCCAC AAAAGGCTAT TGAGAAAATT ATTGATTTTA CATGGGATTA TTATATTGCT 
AACCCCTGGT TTTTAAAAAT TGTGCATAGT GAAAATCAAA GTAAAGGTGT GCATTATGCA 
AAATCACAGC GTCTCTTAGA AATTAACCAT GCGCACTTGC AGTTAATGGA ATCCTTATTG 
GATGAAGGGA AGAAACACAA TATTTTTAAG CCAGATATCG ACCCATTGCA GGTGAATATT 
AATATTGCTG CGCTTGGCGG ATATTATTTG ATCAACCAGC ATACGCTTGG CCTGGTTTAT 
CATATCAGTA TGGTTTCCCC CCAGGCACTG GAAGCCAGAC GTAAGGTCAT CAAAGAGACA 
ATCCTTAGCT GGCTTTTGGT TGACCCTTCA TCTACCGCGC ACGAATAA
 
Protein sequence
MYLDTSNVQS LKEKLLLCAV NEFAEYGYEG ARVDNIVKAA GCSKQTVYHH FGNKENLFIE 
VLEYTWNDIR QKEKALDFSD LLPQKAIEKI IDFTWDYYIA NPWFLKIVHS ENQSKGVHYA 
KSQRLLEINH AHLQLMESLL DEGKKHNIFK PDIDPLQVNI NIAALGGYYL INQHTLGLVY 
HISMVSPQAL EARRKVIKET ILSWLLVDPS STAHE