| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4700 |
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| Symbol | amiB |
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| ID | 6272785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 4391614 |
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| End bp | 4392951 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641728465 |
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| Product | N-acetylmuramoyl-l-alanine amidase II |
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| Protein accession | YP_001882860 |
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| Protein GI | 187733063 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00024565 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGTATC GCATCAGAAA TTGGTTGGTA GCGACGCTGC TGCTGCTGTG CACGCCGGTG
GGTGCCGCGA CGCTCTCTGA TATTCAGGTT TCTAACGGTA ATCAACAGGC GCGGATAACG
TTGAGTTTTA TTGGCGATCC TGATTATGCG TTTAGCCATC AAAGCAAACG CACCGTGGCG
CTCGATATCA AACAAACGGG CGTGATTCAG GGACTGCCGT TGTTGTTCAG CGGCAATAAT
CTGGTGAAGG CGATTCGCTC TGGAACGCCT AAAGATGCAC AAACGCTACG GCTGGTGGTC
GATCTTACCG AAAATGGTAA AACCGAAGCG GTGAAGCGGC AGAATGGCAG CAATTACACT
GTCGTCTTTA CGATTAACGC CGATGTGCCG CCACCGCCTC CTCCGCCGCC CGTGGTTGCG
AAACGCGTTG AAACGCCTGC GGTTGTCGCA CCGCGCGTCA GCGAACCGGC GCGCAATCCG
TTTAAAACGG AAAGTAACCG CACTACGGGT GTTATCAGCA GTAATACGGT AACGCGTCCG
GCAGCGCGCG CGACGGCTAA CACTGGCGAT AAAATTATCA TCGCTATTGA TGCCGGACAC
GGCGGTCAGG ACCCTGGCGC TATCGGCCCC GGTGGTACGC GGGAGAAAAA TGTCACCATC
GCCATCGCGC GTAAATTGCG TACTTTGCTC AATGACGATC CGATGTTTAA AGGCGTTTTA
ACCCGTGACG GGGATTACTT TATTTCGGTG ATGGGGCGCA GCGATGTGGC ACGTAAGCAA
AACGCTAATT TCCTCGTGTC TATTCACGCT GATGCCGCAC CGAACCGCAG TGCGACTGGC
GCTTCCGTAT GGGTGCTCTC TAACCGTCGC GCCAACAGCG AAATGGCCAG CTGGCTGGAG
CAGCACGAGA AACATTCGGA GCTGCTGGGT GGGGCGGGCG ATGTGCTGGC GAACAGTCAG
TCTGATCCCT ATTTAAGCCA GGCGGTGCTG GATTTACAGT TCGGTCATTC CCAGCGGGTA
GGGTATGATG TAGCGACCAG TATGATCAGT CAGTTGCAAC GCATTGGCGA AATACATAAA
CGCCGACCAG AACACGCGAG TCTCGGCGTT CTGCGTTCGC CGGATATCCC GTCAGTACTG
GTCGAAACCG GTTTTATCAG CAACAACAGC GAAGAACGTT TGCTGGCGAG CGACGATTAC
CAACAACAGC TGGCAGAAGC CATTTACAAA GGCCTGCGCA ATTATTTCCT TGCGCATCCG
ATGCAATCTG CGCCGCAGGG TGCAACGGCA CAAACGGCCA GTACGGTGAC GACGCCAGAT
CGCACGCTGC CAAACTAA
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| Protein sequence | MMYRIRNWLV ATLLLLCTPV GAATLSDIQV SNGNQQARIT LSFIGDPDYA FSHQSKRTVA
LDIKQTGVIQ GLPLLFSGNN LVKAIRSGTP KDAQTLRLVV DLTENGKTEA VKRQNGSNYT
VVFTINADVP PPPPPPPVVA KRVETPAVVA PRVSEPARNP FKTESNRTTG VISSNTVTRP
AARATANTGD KIIIAIDAGH GGQDPGAIGP GGTREKNVTI AIARKLRTLL NDDPMFKGVL
TRDGDYFISV MGRSDVARKQ NANFLVSIHA DAAPNRSATG ASVWVLSNRR ANSEMASWLE
QHEKHSELLG GAGDVLANSQ SDPYLSQAVL DLQFGHSQRV GYDVATSMIS QLQRIGEIHK
RRPEHASLGV LRSPDIPSVL VETGFISNNS EERLLASDDY QQQLAEAIYK GLRNYFLAHP
MQSAPQGATA QTASTVTTPD RTLPN
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