Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4668 |
Symbol | aspA |
ID | 6270288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 4363376 |
End bp | 4364812 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641728433 |
Product | aspartate ammonia-lyase |
Protein accession | YP_001882830 |
Protein GI | 187730882 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1027] Aspartate ammonia-lyase |
TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAACA ACATTCGTAT CGAAGAAGAT CTGTTGGGTA CCAGGGAAGT TCCAGCTGAT GCCTACTATG GTGTTCACAC TCTGAGAGCG ATTGAAAACT TCTATATCAG CAACAACAAA ATCAGTGATA TTCCTGAATT TGTTCGCGGT ATGGTAATGG TTAAAAAAGC CGCAGCTATG GCAAACAAAG AGCTGCAAAC CATTCCTAAA AGTGTAGCGA ATGCCATCAT TGCCGCATGT GATGAAGTCC TGAACAACGG AAAATGCATG GATCAGTTCC CGGTAGACGT CTACCAGGGC GGCGCAGGTA CTTCCGTAAA CATGAACACC AACGAAGTGC TGGCCAATAT CGGTCTGGAA CTGATGGGTC ACCAGAAAGG TGAATATCAG TACCTGAACC CGAACGACCA TGTTAACAAA TGTCAGTCCA CTAACGACGC CTACCCGACC GGTTTCCGTA TCGCAGTTTA CTCTTCCCTG ATTAAGCTGG TAGATGCGAT TAACCAACTG CGTGAAGGCT TTGAACGTAA AGCTGTCGAA TTCCAGGACA TCCTGAAAAT GGGTCGTACC CAGCTGCAGG ACGCAGTACC GATGACCCTC GGTCAGGAAT TCCGCGCTTT CAGCATCCTG CTGAAAGAAG AAGTGAAAAA TATCCAACGT ACCGCTGAAC TGCTGCTGGA AGTTAACCTT GGCGCAACAG CAATCGGTAC TGGTCTGAAC ACGCCGAAAG AGTACTCTCC GCTGGCAGTG AAAAAACTGG CTGAAGTCAC TGGCTTCCCA TGCGTACCGG CTGAAGACCT GATCGAAGCG ACCTCTGACT GCGGCGCTTA TGTTATGGTT CACGGCGCGC TGAAACGCCT GGCTGTGAAG ATGTCCAAAA TCTGTAACGA CCTGCGCTTG CTCTCTTCTG GCCCACGTGC CGGCCTGAAC GAGATCAACC TGCCAGAACT GCAGGCGGGC TCTTCCATCA TGCCAGCTAA AGTAAACCCG GTTGTTCCGG AAGTGGTTAA CCAGGTATGC TTCAAAGTCA TCGGTAACGA CACCACTGTT ACCATGGCAG CAGAAGCAGG TCAGCTGCAG TTGAACGTTA TGGAGCCGGT CATTGGCCAG GCCATGTTCG AATCCGTTCA CATTCTGACC AACGCTTGCT ACAACCTGCT GGAAAAATGC ATTAACGGCA TCACTGCTAA CAAAGAAGTG TGCGAAGGTT ACGTTTACAA CTCTATCGGT ATCGTTACTT ACCTGAACCC GTTCATCGGT CACCACAACG GTGACATCGT GGGTAAAATC TGTGCCGAAA CCGGTAAGAG TGTACGTGAA GTCGTTCTGG AACGCGGTCT GTTGACTGAA GCGGAACTTG ACGATATTTT CTCCGTACAG AATCTGATGC ACCCAGCTTA CAAAGCAAAA CGCTATACTG ATGAAAGCGA ACAGTAA
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Protein sequence | MSNNIRIEED LLGTREVPAD AYYGVHTLRA IENFYISNNK ISDIPEFVRG MVMVKKAAAM ANKELQTIPK SVANAIIAAC DEVLNNGKCM DQFPVDVYQG GAGTSVNMNT NEVLANIGLE LMGHQKGEYQ YLNPNDHVNK CQSTNDAYPT GFRIAVYSSL IKLVDAINQL REGFERKAVE FQDILKMGRT QLQDAVPMTL GQEFRAFSIL LKEEVKNIQR TAELLLEVNL GATAIGTGLN TPKEYSPLAV KKLAEVTGFP CVPAEDLIEA TSDCGAYVMV HGALKRLAVK MSKICNDLRL LSSGPRAGLN EINLPELQAG SSIMPAKVNP VVPEVVNQVC FKVIGNDTTV TMAAEAGQLQ LNVMEPVIGQ AMFESVHILT NACYNLLEKC INGITANKEV CEGYVYNSIG IVTYLNPFIG HHNGDIVGKI CAETGKSVRE VVLERGLLTE AELDDIFSVQ NLMHPAYKAK RYTDESEQ
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