| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4605 |
|---|
| Symbol | phnE |
|---|
| ID | 6268379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 4298317 |
|---|
| End bp | 4299096 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641728378 |
|---|
| Product | phosphonate ABC transporter, permease protein |
|---|
| Protein accession | YP_001882776 |
|---|
| Protein GI | 187732726 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACCA TCACCATCGC CCCACCCAAG CGTAGCTGGT TCTCGCTTCT GAGCTGTGCC
GTTGTTCTCG CCGTGCTGGT CGTCTCGTGG CAGGGCGCGG AAATGGCCCC GCTTACGCTG
ATTAAAGACG GCGGCAACAT GGCAACCTTC GTTGCCGACT TCTTCCCGCC CGATTTCAGC
CAGTGGCAGG ATTACCTCAC CGAAATGGCC GTCACGCTGC AAATCGCCGT CTGGGGCACC
GCGCTGGCAG TGGTTCTCTC CATCCCCTTC GGTCTGATGA GCGCCGAAAA CCTGGTGCCG
TGGTGGGTTT ACCAGCCCGT TCGCCGCCTG ATGGATGCCT GCCGCGCCAT TAACGAAATG
GTCTTCGCCA TGCTGTTCGT GGTCGCCGTC GGTCTCGGCC CGTTCGCTGG CGTGCTGGCG
CTATTTATCC ACACCACCGG CGTGCTCTCC AAGCTGCTTT CCGAAGCGGT GGAAGCGATC
GAACCCGGCC CGGTAGAAGG CATTCGCGCC ACCGGCGCCA ACAAGCTGGA AGAGATCCTT
TACGGCGTGC TGCCACAGGT AATGCCGCTG CTGATCTCCT ACTCCCTCTA TCGCTTCGAA
TCCAACGTCC GCTCGGCGAC CGTCGTCGGC ATGGTCGGTG CAGGCGGGAT CGGCGTCACC
CTGTGGGAAG CGATTCGCGG TTTTCAGTTC CAACAAACCT GCGCCCTGAT GGTGCTTATC
ATCGTCACGG TCAGCCTGCT GGATTTCCTC TCTCAACGGT TGCGTAAGCA CTTTATCTGA
|
|---|
| Protein sequence | MQTITIAPPK RSWFSLLSCA VVLAVLVVSW QGAEMAPLTL IKDGGNMATF VADFFPPDFS
QWQDYLTEMA VTLQIAVWGT ALAVVLSIPF GLMSAENLVP WWVYQPVRRL MDACRAINEM
VFAMLFVVAV GLGPFAGVLA LFIHTTGVLS KLLSEAVEAI EPGPVEGIRA TGANKLEEIL
YGVLPQVMPL LISYSLYRFE SNVRSATVVG MVGAGGIGVT LWEAIRGFQF QQTCALMVLI
IVTVSLLDFL SQRLRKHFI
|
|---|
| |