| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4586 |
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| Symbol | actP |
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| ID | 6272840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 4281971 |
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| End bp | 4283620 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641728363 |
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| Product | acetate permease |
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| Protein accession | YP_001882761 |
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| Protein GI | 187730956 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02711] cation/acetate symporter ActP |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.781469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAG TTCTGACGGC GCTTGCCGCC ACACTCCCTT TCGCAGCTAA CGCCGCGGAT
GCTATTAGCG GGGCCGTAGA GCGCCAGCCA ACGAACTGGC AGGCGATTAT TATGTTCCTG
ATTTTCGTCG TGTTTACGCT CGGCATTACC TACTGGGCAT CAAAACGCGT ACGTTCTCGT
AGCGACTACT ACACGGCAGG CGGCAATATC ACAGGCTTCC AGAACGGGCT GGCGATTGCC
GGTGACTATA TGTCCGCCGC CTCATTTTTG GGGATCTCCG CGCTGGTGTT TACCTCCGGC
TATGACGGCT TAATTTACTC GCTGGGCTTC CTGGTGGGCT GGCCGATCAT TTTGTTCCTG
ATTGCCGAAC GTCTGCGTAA CCTGGGACGC TACACCTTTG CCGATGTAGC CTCTTACCGC
CTGAAACAAG GGCCGATTCG TATTCTTTCG GCCTGTGGTT CTCTGGTGGT GGTGGCGCTT
TACCTTATCG CCCAGATGGT AGGCGCAGGT AAACTGATCG AGCTGCTGTT TGGCCTTAAC
TATCACATTG CGGTGGTGCT GGTCGGCGTG CTGATGATGA TGTACGTCCT GTTCGGCGGC
ATGCTGGCGA CCACCTGGGT GCAAATTATT AAAGCCGTGC TGTTGCTGTT CGGTGCCAGC
TTTATGGCCT TTATGGTGAT GAAACACGTC GGCTTTAGCT TCAATAATCT GTTCAGCGAA
GCGATGGCGG TACACCCGAA AGGTGTCGAC ATCATGAAGC CGGGCGGGCT GGTGAAAGAT
CCGATCTCCG CGCTCTCTCT GGGTCTGGGA CTGATGTTTG GTACGGCGGG CTTGCCGCAC
ATTCTGATGC GCTTCTTTAC AGTCAGCGAT GCCCGCGAAG CACGTAAGAG CGTGTTCTAC
GCCACCGGGT TTATGGGCTA CTTCTATATT CTGACCTTTA TTATCGGCTT CGGCGCGATC
ATGCTGGTTG GTGCGAATCC GGAATATAAA GACGCGGCGG GCCATCTGAT TGGTGGTAAC
AACATGGCGG CCGTTCACCT GGCGAATGCA GTGGGCGGCA ACCTGTTCCT CGGTTTTATT
TCAGCGGTTG CTTTCGCCAC TATCCTCGCG GTGGTTGCGG GTCTGACGCT GGCGGGCGCA
TCCGCGGTTT CGCATGACTT GTTCGCTAAC GTCTTCAAAA AAGGTGCGAC CGAACGTGAA
GAACTGCGGG TATCGAAAAT CACCGTCCTG ATTTTGGGTG TGATTGCGAT TATCCTCGGC
GTGCTGTTTG AGAATCAGAA CATCGCCTTT ATGGTAGGCC TTGCGTTTGC CATCGCGGCG
AGCTGTAACT TCCCGATCAT TCTGCTTTCC ATGTACTGGT CGAAACTGAC TACCCGTGGC
ACGATGCTGG GCGGCTGGCT GGGGCTGATT ACCGCAGTGG TGCTGATGAT CCTCGGCCCA
ACTATTTGGG TACAGATCCT CGGTCACGAA AAAGCCATCT TCCCGTATGA ATACCCGGCG
CTGTTCTCTA TCAGCGTGGC ATTCCTCGGC ATCTGGTTCT TCTCGGCAAC CGATAACTCA
GCGGAAGGTG CGCGCGAGCG TGAACTGTTC CGTGCGCAGT TTATCCGCTC CCAGACCGGC
TTTGGCGTTG AGCAAGGCCG CGCACATTAA
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| Protein sequence | MKRVLTALAA TLPFAANAAD AISGAVERQP TNWQAIIMFL IFVVFTLGIT YWASKRVRSR
SDYYTAGGNI TGFQNGLAIA GDYMSAASFL GISALVFTSG YDGLIYSLGF LVGWPIILFL
IAERLRNLGR YTFADVASYR LKQGPIRILS ACGSLVVVAL YLIAQMVGAG KLIELLFGLN
YHIAVVLVGV LMMMYVLFGG MLATTWVQII KAVLLLFGAS FMAFMVMKHV GFSFNNLFSE
AMAVHPKGVD IMKPGGLVKD PISALSLGLG LMFGTAGLPH ILMRFFTVSD AREARKSVFY
ATGFMGYFYI LTFIIGFGAI MLVGANPEYK DAAGHLIGGN NMAAVHLANA VGGNLFLGFI
SAVAFATILA VVAGLTLAGA SAVSHDLFAN VFKKGATERE ELRVSKITVL ILGVIAIILG
VLFENQNIAF MVGLAFAIAA SCNFPIILLS MYWSKLTTRG TMLGGWLGLI TAVVLMILGP
TIWVQILGHE KAIFPYEYPA LFSISVAFLG IWFFSATDNS AEGARERELF RAQFIRSQTG
FGVEQGRAH
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