| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4541 |
|---|
| Symbol | tyrB |
|---|
| ID | 6271963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 4245232 |
|---|
| End bp | 4246425 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641728324 |
|---|
| Product | aromatic amino acid aminotransferase |
|---|
| Protein accession | YP_001882722 |
|---|
| Protein GI | 187730876 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTTCAAA AAGTTGACGC CTACGCTGGC GACCCGATTC TTACGCTTAT GGAGCGTTTT
AAAGAAGACC CTCGCAGCGA CAAAGTGAAT TTAAGTATCG GTCTGTACTA CAACGAAGAC
GGAATTATTC CACAACTGAA AGCCGTGGCG GAGGCGGAAG CGCGCCTGAA TGCGCAGCCC
CATGGCGCTT CGCTTTATTT ACCGATGGAA GGGCTTAACA GCTATCGCCA TGCCATTGCG
CCGCTGCTGT TTGGTGCGGA CCATCCGGTA CTGCAACAAC AGCGCGTAGC AACCATTCAA
ACCCTTGGCG GCTCAGGGGC ATTGAAAGTG GGCGCGGATT TCCTGAAACG CTACTTCCCG
GAATCAGGCG TCTGGGTCAG CGATCCTACC TGGGAAAACC ACGTAGCAAT ATTCGCCGGG
GCTGGATTCG AAGTGAGTAC TTACCCCTGG TATGACGAAG CGACTAACAG CGTGCGCTTT
AATGACCTGT TGGCGACGCT GAAAACATTA CCTGCCCGCA GTATTGTGTT GCTGCATCCA
TGTTGCCACA ACCCAACAGG TGCCGATCTC ACTAATGATC AGTGGGATGC GGTGATTAAA
ATTCTCAAAG CCCGCGAGCT TATCCCATTC CTCGATATTG CCTATCAAGG ATTTAGTGCC
GGTATGGAAG AGGATGCCTA CGCTATTCGC GCCATTGCCA GCGCTGGATT ACCCGCTCTG
GTGAGCAATT CGTTCTCGAA AATTTTCTCC CTTTACGGCG AGCGCGTCGG CGGACTTTCT
GTTCTGTGTG AAGATGCCGA AGCCGCTGGC CGCGTACTGG GGCAATTGAA AGCAACAGTT
CGCCGCAACT ACTCCAGCCC GCCGAATTTG GGTGCGCAGG TGGTGGCTGC AGTGCTGAAT
GACGAGGCAT TGAAAGCCAG CTGGCTGGCG GAAGTAGAAG AGATGCGTAC TCGCATTCTG
GCAATGCGTC AGGAATTGGT GAAGGTATTA AGCACAGAGA TGCCAGAACG CAATTTCGAT
TATCTGCTTA ATCAGCGCGG CATGTTCAGT TATACCGGTT TAAGTGCCGC TCAGGTTGAC
CGACTACGTG AAGAATTTGG TGTCTATCTC ATCGCCAGCG GTCGCATGTG TGTCGCCGGG
TTAAATACGG CAAATGTACA ACGTGTGGCA AAGGCGTTTG CTGCGGTGAT GTAA
|
|---|
| Protein sequence | MFQKVDAYAG DPILTLMERF KEDPRSDKVN LSIGLYYNED GIIPQLKAVA EAEARLNAQP
HGASLYLPME GLNSYRHAIA PLLFGADHPV LQQQRVATIQ TLGGSGALKV GADFLKRYFP
ESGVWVSDPT WENHVAIFAG AGFEVSTYPW YDEATNSVRF NDLLATLKTL PARSIVLLHP
CCHNPTGADL TNDQWDAVIK ILKARELIPF LDIAYQGFSA GMEEDAYAIR AIASAGLPAL
VSNSFSKIFS LYGERVGGLS VLCEDAEAAG RVLGQLKATV RRNYSSPPNL GAQVVAAVLN
DEALKASWLA EVEEMRTRIL AMRQELVKVL STEMPERNFD YLLNQRGMFS YTGLSAAQVD
RLREEFGVYL IASGRMCVAG LNTANVQRVA KAFAAVM
|
|---|
| |