Gene SbBS512_E4451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4451 
SymboltrmA 
ID6269435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp4162507 
End bp4163607 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content51% 
IMG OID641728247 
ProducttRNA (uracil-5-)-methyltransferase 
Protein accessionYP_001882659 
Protein GI187731935 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID[TIGR02143] tRNA (uracil-5-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.14135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCCG AACACCTTCC AACAGAACAG TATGAAGCGC AGTTAGCCGA AAAAGTGGTA 
CGTTTGCAAA GTATGATGGC ACCGTTTTCT GACCTGGTTC CGGAAGTGTT TCGCTCGCCG 
GTCAGTCATT ACCGGATGCG TGCGGAGTTC CGCATCTGGC ACGATGGCGA TGACCTGTAT 
CACATCATTT TCGATCAACA AACCAAAAGC CGTATCCGCG TGGATAGCTT CCCCGCCGCC 
AGTGAACTTA TCAACCAGTT GATGACGGCG ATGATTGCGG GTGTGCGTAA TAATCCCGTT 
CTGCGCCACA AGTTGTTCCA GATTGATTAC CTCACCACGC TGAGTAATCA GGCGGTGGTT 
TCCCTGCTAT ACCATAAGAA GCTGGATGAT GAGTGGCGTC AGGAAGCGGA GGCCCTGCGC 
GATGCACTGC GCGCGCAGAA TCTGAATGTG CATCTGATTG GTCGGGCAAC GAAAACCAAA 
ATCGAGCTGG ATCAAGATTA CATCGACGAG CGTCTGCCGG TCGCAGGGAA AGAGATGATC 
TACCGTCAGG TAGAAAACAG CTTTACCCAG CCGAACGCGG CGATGAATAT TCAGATGCTG 
GAATGGGCGC TGGACGTAAC CAAAGGCTCA AAAGGCGATT TACTGGAGCT GTACTGCGGC 
AACGGTAACT TTTCATTAGC GCTGGCGCGC AATTTTGATC GGGTATTAGC CACCGAAATC 
GCTAAGCCGT CGGTTGCTGC TGCGCAATAC AACATCGCAG CTAACCATAT TGATAACGTA 
CAAATTATTC GTATGGCGGC AGAAGAATTT ACTCAGGCGA TGAATGGTGT GCGCGAGTTT 
AACCGCCTGC AAGGGATCGA CTTAAAGAGT TATCAGTGCG AAACCATTTT TGTCGACCCA 
CCGCGCAGCG GTCTGGACAG TGAAACCGAG AAAATGGTGC AGGCGTATCC GTGTATTTTG 
TACATCTCCT GTAACCCGGA AACGTTATGC AAGAATCTGG AAACATTAAG CCAGACGCAC 
AAGGTCGAAC GTCTGGCTCT GTTTGATCAG TTCCCCTACA CGCACCATAT GGAGTGCGGC 
GTATTACTGA CCGCGAAGTA A
 
Protein sequence
MTPEHLPTEQ YEAQLAEKVV RLQSMMAPFS DLVPEVFRSP VSHYRMRAEF RIWHDGDDLY 
HIIFDQQTKS RIRVDSFPAA SELINQLMTA MIAGVRNNPV LRHKLFQIDY LTTLSNQAVV 
SLLYHKKLDD EWRQEAEALR DALRAQNLNV HLIGRATKTK IELDQDYIDE RLPVAGKEMI 
YRQVENSFTQ PNAAMNIQML EWALDVTKGS KGDLLELYCG NGNFSLALAR NFDRVLATEI 
AKPSVAAAQY NIAANHIDNV QIIRMAAEEF TQAMNGVREF NRLQGIDLKS YQCETIFVDP 
PRSGLDSETE KMVQAYPCIL YISCNPETLC KNLETLSQTH KVERLALFDQ FPYTHHMECG 
VLLTAK