Gene SbBS512_E4347 details

Gene Information

• Locus tag: SbBS512_E4347
• Symbol: typA
• ID: 6272345
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 4062676
• End bp: 4064499
• Gene Length: 1824 bp
• Protein Length: 607 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641728156
• Product: GTP-binding protein
• Protein accession: YP_001882569
• Protein GI: 187732985
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00485] translation elongation factor TU; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGAAA AATTGCGTAA TATCGCCATC ATCGCGCACG TAGACCATGG TAAAACCACC 
CTGGTAGACA AGCTGCTCCA ACAATCCGGT ACGTTCGACT CTCGTGCCGA AACCCAAGAG 
CGCGTGATGG ACTCCAACGA TTTGGAGAAA GAGCGTGGGA TTACCATCCT CGCGAAAAAC 
ACCGCTATCA AATGGAATGA TTACCGTATC AACATCGTTG ATACCCCGGG GCACGCCGAC 
TTCGGTGGTG AAGTTGAACG TGTAATGTCC ATGGTAGACT CAGTGCTGCT GGTGGTTGAC 
GCATTTGACG GCCCGATGCC GCAAACGCGC TTCGTAACCA AAAAAGCGTT TGCTTACGGC 
CTGAAGCCGA TTGTTGTTAT CAACAAAGTT GACCGCCCTG GCGCGCGTCC TGATTGGGTT 
GTGGATCAGG TATTCGATCT GTTCGTTAAC CTCGACGCGA CCGACGAGCA GCTGGACTTC 
CCGATCGTTT ACGCTTCTGC GCTGAACGGT ATCGCGGGTC TGGACCACGA AGATATGGCG 
GAAGACATGA CCCCGCTGTA CCAGGCGATT GTTGACCACG TTCCTGCGCC GGACGTTGAC 
CTTGACGGTC CGTTCCAGAT GCAGATTTCT CAGCTCGATT ACAACAGCTA TGTTGGCGTT 
ATCGGCATTG GCCGCATCAA GCGCGGTAAA GTGAAGCCGA ACCAGCAGGT CACTATCATC 
GATAGCGAAG GCAAAACCCG CAACGCGAAA GTCGGTAAAG TGCTGGGCCA CCTCGGTCTG 
GAACGTATCG AAACCGACCT GGCGGAAGCT GGCGATATCG TTGCGATCAC GGGCCTTGGC 
GAACTGAACA TTTCTGACAC CGTTTGCGAC ACGCAAAACG TTGAAGCGCT GCCGGCACTC 
TCCGTTGATG AGCCGACCGT TTCTATGTTC TTCTGCGTTA ACACCTCGCC GTTCTGCGGT 
AAAGAAGGTA AGTTCGTAAC GTCTCGTCAG ATCCTGGATC GTCTGAACAA AGAACTGGTA 
CACAACGTTG CGCTGCGCGT AGAAGAAACC GAAGACGCTG ATGCGTTCCG CGTTTCTGGT 
CGTGGCGAAC TACACCTGTC TGTTCTGATC GAAAACATGC GTCGTGAAGG TTTCGAACTG 
GCGGTATCCC GTCCGAAAGT TATCTTCCGT GAAATCGACG GTCGTAAACA AGAGCCATAT 
GAAAACGTGA CTCTGGACGT TGAAGAACAG CATCAGGGTT CTGTAATGCA GGCGCTGGGC 
GAACGTAAAG GCGACCTGAA AAACATGAAT CCAGACGGTA AAGGCCGCGT ACGTCTCGAC 
TACGTGATCC CAAGCCGTGG TCTGATTGGC TTCCGTTCTG AGTTCATGAC CATGACTTCC 
GGTACTGGTC TGCTGTACTC CACCTTCAGC CACTACGACG ACGTACGTCC GGGTGAAGTG 
GGTCAGCGTC AGAACGGCGT ACTGATCTCT AACGGTCAGG GTAAAGCGGT CGCGTTCGCG 
CTGTTCGGTC TGCAGGATCG CGGTAAGCTG TTCCTCGGTC ACGGTGCAGA AGTTTACGAA 
GGTCAGATTA TCGGTATTCA TAGCCGCTCT AACGACCTGA CTGTAAACTG CCTGACCGGT 
AAGAAACTGA CCAACATGCG TGCTTCCGGT ACTGACGAAG CCGTTGTTCT GGTTCCGCCT 
ATCCGCATGA CTCTGGAACA AGCTCTGGAG TTCATCGATG ATGACGAACT GGTAGAAGTG 
ACTCCGACCT CTATCCGTAT TCGTAAACGT CACCTGACGG AAAACGATCG TCGTCGCGCC 
AACCGCGCAC CGAAAGACTA TTAA 

 

Protein sequence

MIEKLRNIAI IAHVDHGKTT LVDKLLQQSG TFDSRAETQE RVMDSNDLEK ERGITILAKN 
TAIKWNDYRI NIVDTPGHAD FGGEVERVMS MVDSVLLVVD AFDGPMPQTR FVTKKAFAYG 
LKPIVVINKV DRPGARPDWV VDQVFDLFVN LDATDEQLDF PIVYASALNG IAGLDHEDMA 
EDMTPLYQAI VDHVPAPDVD LDGPFQMQIS QLDYNSYVGV IGIGRIKRGK VKPNQQVTII 
DSEGKTRNAK VGKVLGHLGL ERIETDLAEA GDIVAITGLG ELNISDTVCD TQNVEALPAL 
SVDEPTVSMF FCVNTSPFCG KEGKFVTSRQ ILDRLNKELV HNVALRVEET EDADAFRVSG 
RGELHLSVLI ENMRREGFEL AVSRPKVIFR EIDGRKQEPY ENVTLDVEEQ HQGSVMQALG 
ERKGDLKNMN PDGKGRVRLD YVIPSRGLIG FRSEFMTMTS GTGLLYSTFS HYDDVRPGEV 
GQRQNGVLIS NGQGKAVAFA LFGLQDRGKL FLGHGAEVYE GQIIGIHSRS NDLTVNCLTG 
KKLTNMRASG TDEAVVLVPP IRMTLEQALE FIDDDELVEV TPTSIRIRKR HLTENDRRRA 
NRAPKDY