| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4340 |
|---|
| Symbol | |
|---|
| ID | 6270097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 4055768 |
|---|
| End bp | 4056277 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641728150 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001882563 |
|---|
| Protein GI | 187733113 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3078] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.00410643 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAT CATCTTCAAA CTCACGCAGC AAAGGTCATG CAAAAGCGCG TCGAAAAACA
CGCGAGGAGC TGGATCAGGA AGCTCGTGAT CGCAAGCGTC AGAAAAAACG TCGTGGTCAT
GCGCCGGGCA GCCGCGCAGC GGGCGGAAAC ACCACGTCAG GCAGCAAAGG CCAGAACGCA
CCAAAAGATC CACGTATTGG CAGTAAAACC CCTATTCCAT TGGGCGTGAC TGAAAAAGTC
ACCAAACAGC ACAAACCGAA GAGTGAGAAA CCTATGCTTT CACCGCAGGC GGAGTTGGAA
TTACTGGAAA CGGATGAGCG TCTGGATGCG CTGCTGGAAC GTCTGGAAGC AGGCGAAACC
CTGAGTGCCG AAGAGCAATC CTGGGTGGAT GCTAAACTGG ATCGTATTGA TGAGTTGATG
CAGAAACTCG GCCTCTCTTA TGACGATGAC GAAGAAGAGG AAGAAGACGA GAAGCAAGAA
GACATGATGC GTCTGCTGCG GGGCAACTAA
|
|---|
| Protein sequence | MKPSSSNSRS KGHAKARRKT REELDQEARD RKRQKKRRGH APGSRAAGGN TTSGSKGQNA
PKDPRIGSKT PIPLGVTEKV TKQHKPKSEK PMLSPQAELE LLETDERLDA LLERLEAGET
LSAEEQSWVD AKLDRIDELM QKLGLSYDDD EEEEEDEKQE DMMRLLRGN
|
|---|
| |