| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4339 |
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| Symbol | engB |
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| ID | 6269864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 4054554 |
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| End bp | 4055186 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641728148 |
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| Product | ribosome biogenesis GTP-binding protein YsxC |
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| Protein accession | YP_001882562 |
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| Protein GI | 187732245 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0218] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.000143323 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGACTAATT TGAATTATCA ACAGACGCAT TTTGTGATGA GTGCGCCTGA TATTCGCCAC
CTACCTTCCG ATACCGGAAT TGAAGTGGCT TTTGCAGGCC GTTCCAACGC AGGTAAATCC
AGCGCGCTGA ACACGCTGAC TAACCAGAAA AGCCTGGCTC GTACCTCAAA AACCCCAGGG
CGCACCCAGC TTATCAACCT GTTTGAAGTG GCTGACGGCA AGCGTCTGGT TGACTTGCCT
GGGTACGGTT ATGCGGAAGT CCCGGAAGAG ATGAAGCGCA AATGGCAGCG TGCGCTCGGC
GAATACCTCG AAAAACGTCA GAGCCTGCAA GGTCTGGTGG TGCTAATGGA TATTCGCCAT
CCGCTGAAAG ATTTGGATCA GCAGATGATT GAGTGGGCGG TAGACAGCAA TATCGCCGTT
CTGGTGCTGC TGACCAAAGC GGACAAACTG GCAAGCGGCG CACGTAAAGC GCAATTGAAT
ATGGTGCGTG AAGCTGTACT GGCGTTTAAC GGTGATGTGC AGGTTGAAAC GTTTTCTTCG
TTGAAGAAAC AAGGCGTGGA CAAGCTGCGG CAGAAACTGG ATACCTGGTT TAGCGAGATG
CAGCCTGTAG AAGAAACGCA GGACGGCGAA TAA
|
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| Protein sequence | MTNLNYQQTH FVMSAPDIRH LPSDTGIEVA FAGRSNAGKS SALNTLTNQK SLARTSKTPG
RTQLINLFEV ADGKRLVDLP GYGYAEVPEE MKRKWQRALG EYLEKRQSLQ GLVVLMDIRH
PLKDLDQQMI EWAVDSNIAV LVLLTKADKL ASGARKAQLN MVREAVLAFN GDVQVETFSS
LKKQGVDKLR QKLDTWFSEM QPVEETQDGE
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