Gene SbBS512_E4318 details

Gene Information

• Locus tag: SbBS512_E4318
• ID: 6272702
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 4037080
• End bp: 4037697
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641728128
• Product: hypothetical protein
• Protein accession: YP_001882548
• Protein GI: 187732095
• COG category: [S] Function unknown
• COG ID: [COG1739] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00257] uncharacterized protein, YigZ family

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0000068448
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATGGAAA GCTGGTTAAT TCCTGCGGCA CCGGTCACGG TCGTTGAAGA GATCAAAAAG 
AGCCGCTTCA TAACGATGTT GGCGCATACC GATGGCGTTG AGGCGGCGAA AGCGTTTGTT 
GAATCGGTGC GGGCAGAACA CCCCGATGCC CGCCACCATT GCGTGGCGTG GGTGGCGGGT 
GCGCCGGATG ATTCTCAACA GCTGGGTTTC TCTGACGACG GGGAGCCGGC GGGAACGGCA 
GGTAAACCGA TGCTCGCCCA GCTAATGGGC AGCGGCGTCG GGGAAATTAC CGCTGTGGTA 
GTGCGCTACT ACGGCGGCAT ATTGCTTGGC ACCGGTGGGT TAGTGAAAGC GTATGGCGGC 
GGCGTGAATC AGGCGCTGCG CCAGCTAACG ACCCAACGCA AGACGCCATT AACCGAATAT 
ACTTTGCAAT GTGAATATAG TCAGTTAACC GGCATTGAAG CGTTGCTGGG GCAGTGTGAC 
GGCAAAATTA TCAACAGTGA TTATCAGGCA TTCGTTCTGC TGCGGGTGGC GCTTCCGGCG 
GCGAAAGTGG CTGAATTTTC CGCAAAGCTG GCGGATTTTA GCCGTGGTTC ATTGCAATTG 
TTAGCGATTG AAGAATAA 

 

Protein sequence

MMESWLIPAA PVTVVEEIKK SRFITMLAHT DGVEAAKAFV ESVRAEHPDA RHHCVAWVAG 
APDDSQQLGF SDDGEPAGTA GKPMLAQLMG SGVGEITAVV VRYYGGILLG TGGLVKAYGG 
GVNQALRQLT TQRKTPLTEY TLQCEYSQLT GIEALLGQCD GKIINSDYQA FVLLRVALPA 
AKVAEFSAKL ADFSRGSLQL LAIEE