Gene SbBS512_E4289 details

Gene Information

• Locus tag: SbBS512_E4289
• Symbol: recQ
• ID: 6272636
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 4006550
• End bp: 4008379
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641728100
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_001882520
• Protein GI: 187734194
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCGCAGG CGGAAGTGTT GAATCTGGAG TCCGGAGCTA AACAGGTTTT ACAAGAAACC 
TTTGGCTACC AACAGTTTCG CCCCGGCCAG GAAGAAATTA TCGACACTGT GCTTTCCGGT 
CGCGATTGCC TGGTCGTCAT GCCCACCGGT GGCGGAAAAT CCCTTTGCTA TCAAATTCCT 
GCCTTATTGC TAAACGGCCT TACCGTGGTT GTTTCACCGC TGATTTCGTT GATGAAAGAT 
CAGGTGGATC AACTGCAAGC CAACGGCGTG GCGGCGGCGT GCCTTAACTC GACGCAAACC 
CGCGAGCAGC AACTTGAAGT GATGACAGGC TGCCGCACCG GGCAAATTCG TCTGCTTTAT 
ATCGCCCCGG AACGCCTGAT GCTGGATAAC TTTCTTGAGC ATCTGGCGCA CTGGAATCCG 
GTGTTATTAG CCGTTGATGA AGCGCACTGT ATCTCCCAAT GGGGCCACGA TTTCCGCCCG 
GAATATGCCG CGCTTGGTCA GTTACGCCAG CGTTTCCCGA CCCTGCCGTT TATGGCGCTG 
ACTGCCACAG CCGACGACAC CACGCGCCAG GATATCGTGC GCTTGCTGGG GCTGAACGAT 
CCGCTGATTC AAATCAGCAG TTTTGACCGT CCGAATATTC GCTACATGCT GATGGAGAAG 
TTCAAACCGC TCGATCAGTT GATGCGCTAC GTGCAGGAAC AGCGCGGTAA GTCAGGCATT 
ATCTACTGCA ACAGCCGCGC GAAAGTAGAA GACACCGCTG CGCGCCTGCA AAGCAAGGGA 
ATTAGCGCGG CGGCCTATCA TGCTGGGCTG GAAAATAATG TTCGCGCCGA CGTGCAGGAA 
AAATTTCAGC GCGATGACCT GCAAATTGTG GTGGCGACGG TGGCGTTCGG CATGGGCATC 
AATAAACCAA ACGTTCGCTT CGTGGTCCAC TTTGATATTC CGCGCAATAT CGAATCCTAT 
TATCAGGAAA CCGGTCGCGC CGGGCGTGAT GGCCTGCCCG CGGAAGCGAT GCTGTTTTAC 
GATCCGGCCG ATATGGCGTG GCTGCGCCGT TGCCTGGAAG AGAAGCCGCA GGGGCAGTTA 
CAGGATATCG AACGTCATAA ACTCAATGCG ATGGGCGCTT TTGCCGAAGC GCAAACTTGC 
CGTCGTCTGG TATTGCTGAA CTATTTTGGC GAAGGGCGGC AAGAGCCGTG CGGGAACTGC 
GATATCTGCC TCGATCCGCC GAAACAGTAC GACGGTTCAA CCGATGCTCA GATTGCCCTT 
TCCACCATTG GTCGTGTGAA TCAGCGGTTT GGGATGGGTT ATGTGGTGGA AGTGATTCGT 
GGTGCTAATA ACCAGCGTAT CCGCGACTAT GGTCATGACA AACTGAAAGT CTATGGCATG 
GGCCGTGATA AAAGCCATGA ACATTGGGTG AGCGTGATCC GCCAGCTGAT TCACCTCGGC 
CTGGTGACGC AAAATATTGC CCAGCATTCT GCCCTACAAC TGACAGAGGC CGCGCGCCCG 
GTGCTGCGCG GCGAATCCTC TTTGCAACTT GCCGTGCCGC GTATCGTGGC GCTCAAACCG 
AAAGCGATGC AGAAATCGTT CGGCGGCAAC TATGATCGCA AACTGTTCGC CAAATTACGC 
AAACTGCGTA AATCGATTGC CGATGAAAGT AATGTCCCGC CGTACGTGGT GTTTAACGAC 
GCAACCTTGA TTGAGATGGC TGAACAGATG CCGATCACCG CCAGCGAAAT GCTCAGCGTT 
AACGGCGTTG GGATGCGCAA GCTGGAACGC TTTGGTAAAC CGTTTATGGC GCTGATTCGT 
GCGCATGTCG ATGGCGACGA CGAAGAGTAG 

 

Protein sequence

MAQAEVLNLE SGAKQVLQET FGYQQFRPGQ EEIIDTVLSG RDCLVVMPTG GGKSLCYQIP 
ALLLNGLTVV VSPLISLMKD QVDQLQANGV AAACLNSTQT REQQLEVMTG CRTGQIRLLY 
IAPERLMLDN FLEHLAHWNP VLLAVDEAHC ISQWGHDFRP EYAALGQLRQ RFPTLPFMAL 
TATADDTTRQ DIVRLLGLND PLIQISSFDR PNIRYMLMEK FKPLDQLMRY VQEQRGKSGI 
IYCNSRAKVE DTAARLQSKG ISAAAYHAGL ENNVRADVQE KFQRDDLQIV VATVAFGMGI 
NKPNVRFVVH FDIPRNIESY YQETGRAGRD GLPAEAMLFY DPADMAWLRR CLEEKPQGQL 
QDIERHKLNA MGAFAEAQTC RRLVLLNYFG EGRQEPCGNC DICLDPPKQY DGSTDAQIAL 
STIGRVNQRF GMGYVVEVIR GANNQRIRDY GHDKLKVYGM GRDKSHEHWV SVIRQLIHLG 
LVTQNIAQHS ALQLTEAARP VLRGESSLQL AVPRIVALKP KAMQKSFGGN YDRKLFAKLR 
KLRKSIADES NVPPYVVFND ATLIEMAEQM PITASEMLSV NGVGMRKLER FGKPFMALIR 
AHVDGDDEE