Gene SbBS512_E4235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4235 
Symbol 
ID6270563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3960159 
End bp3960875 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content51% 
IMG OID641728055 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001882476 
Protein GI187730068 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTACA AAAGCATTGC GGAGCGGTTA AGAATTCGAC TTAATTCCGC GGATTTCACG 
CTAAACAGCC TTCTTCCCGG TGAAAAAAAG TTGGCGGAAG AATTTGCAGT ATCCCGGATG
ACCATCCGTA AAGCGATTGA CCTGCTGGTA GCGTGGGGGC TGGTGGTCCG CCGCCACGGC
AGCGGCACTT ACCTGGTGCG CAAAGATGTG CTGCATCAAA CCGCCAGCCT GACCGGACTG
GTGGAGGTGT TAAAACGGCA GGGAAAAACG GTCACCAGCC AGGTGCTGAT TTTTGAAATC
ATGCCTGCGC CTCCGGCCAT TGCCAGCCAG TTACGGATTC AAATCAACGA GCAGATCTAC
TTCTCCCGTC GCGTTCGTTT TGTGGAAGGG AAACCGCTGA TGCTGGAAGA CAGCTATATG
CCGGTTAAAC TGTTCCGTAA TCTTTCGCTG CAACATCTGG AAGGGTCGAA GTTTGAATAT
ATTGAACAAG AGTGTGGGAT TTTGATTGGC GGTAATTATG AAAGCCTGAC GCCGGTGCTC
GCCGATAGAC TGCTGGCGCG GCAAATGAAG GTAGCGGAAC ACACGCCACT GCTGCGGATC
ACCTCGTTGT CATATAGCGA GAGCGGGGAG TTTTTGAATT ATTCAGTGAT GTTCAGAAAT
GCCAGCGAAT ACCAGGTGGA GTACCATTTA CGGCGACTCC ACCCGGAAAA GAGTTAA
 
Protein sequence
MIYKSIAERL RIRLNSADFT LNSLLPGEKK LAEEFAVSRM TIRKAIDLLV AWGLVVRRHG 
SGTYLVRKDV LHQTASLTGL VEVLKRQGKT VTSQVLIFEI MPAPPAIASQ LRIQINEQIY
FSRRVRFVEG KPLMLEDSYM PVKLFRNLSL QHLEGSKFEY IEQECGILIG GNYESLTPVL
ADRLLARQMK VAEHTPLLRI TSLSYSESGE FLNYSVMFRN ASEYQVEYHL RRLHPEKS